EST details — SGN-E396552
| Search information |
| Request: 396552 | Match: SGN-E396552 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C183996 | Clone name: TUS-43-K2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183996 is on microarray TOM1 spot ID 1-1-7.3.19.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C2890 [cLEC-17-K12] | Trace: SGN-T27173 | EST: SGN-E203757 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183996 [TUS-43-K2] | Trace: SGN-T197879 | EST: SGN-E396553 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E396552 | Length: 549 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E396552 [] (trimmed)
GCCAGACAAATATATTTCTGTTCTTATTATTAAAATTTTGTAAAATGAATCAACTATTCAACTAATAAAAGTAGTTAAACAAACTACTTTTTTTT
TTCTTTTTTTTCTGAGTCTCTATAAATTCTATTTTTTTTTTCTTTTCTTTTTTTGGTATGAATACACAATGTCTCTATTGATCATGACCTTCATC
TCCAATAAGCAAATTTTTCCAGCAGAGTTAGCAAAATGTGAAACAGAAGATAATAAAAACTGCGTCGTCTACGACTACCGTCTAATATATATCAG
TGGAAGTTCCTGAAAAAATTGAATCATCTCTAATCTCCATATTTTATCTATCGTACAGCGTTCAGAAGTGTATCAAGAAAATCATCATAAGCAGA
AGAAAAGCAGAAATAAAGAAGGCATTTTTCTTAGCAGCTGAATAGTCCATACGTGGAAGAAACCCTCGTAACCCGATGTTAGAAACTGGAGTTCC
ATCAGGGTAGTAGAAACCATAATTCCTCTCTGATGCGGGACCAGGCTTTAAATTTTCGTGAAAAGGTGCAAAAC
TTCTTTTTTTTCTGAGTCTCTATAAATTCTATTTTTTTTTTCTTTTCTTTTTTTGGTATGAATACACAATGTCTCTATTGATCATGACCTTCATC
TCCAATAAGCAAATTTTTCCAGCAGAGTTAGCAAAATGTGAAACAGAAGATAATAAAAACTGCGTCGTCTACGACTACCGTCTAATATATATCAG
TGGAAGTTCCTGAAAAAATTGAATCATCTCTAATCTCCATATTTTATCTATCGTACAGCGTTCAGAAGTGTATCAAGAAAATCATCATAAGCAGA
AGAAAAGCAGAAATAAAGAAGGCATTTTTCTTAGCAGCTGAATAGTCCATACGTGGAAGAAACCCTCGTAACCCGATGTTAGAAACTGGAGTTCC
ATCAGGGTAGTAGAAACCATAATTCCTCTCTGATGCGGGACCAGGCTTTAAATTTTCGTGAAAAGGTGCAAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E396552] | SGN-U585972 | Tomato 200607 | Build 2 | 57 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T197878 [Download][View] | Facility Assigned ID: FA0AAD31BF01FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.929 | Expected Error Rate: 0.0016 | Quality Trim Threshold: 14.5 |
Working
