EST details — SGN-E396786

Search information 
Request: 396786Match: SGN-E396786
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183942Clone name: TUS-43-H20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183942 is on microarray TOM1 spot ID 1-1-5.4.18.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7811 [cLEC-40-F20] Trace: SGN-T32295 EST: SGN-E210231 Direction: 5' Facility: TIGR
Clone: SGN-C183942 [TUS-43-H20] Trace: SGN-T197960 EST: SGN-E396634 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396786Length: 504 bp (914 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396786 [] (trimmed) TAATTGCAAAAATAAGCCAAAATTTGGTGCAATTGTACAAAGCCCTACCCCAACTCATTACAAATGTCTTGAAAAAATTCAAAAAACAAAATTGG
GTGCTCCAAATTCATGATTCAAAATCCCAAAATACACACACGTCATTAAAGGGAAAAAAAAACATCTCCAATCATAACAAGGTCAAAAATGTCAA
AGCATTCAGCATTACATGTGCTTAGGAGGCACATTCGTGCGTTTGGAGCACAAGTCTCACAAAACTAACCCCTACAAAAAAACGTCAAAACCCCC
TTCCCCGAGCGAGCACTGAACAATTTCTAAAGAGCCTTCTAAACAGTGTTTACATTTACATGCACCATGCAATCAAAAAGGGAAGGAAACAACTT
TAAAAATAAAAAGGACTTGAAAACATTGATAAATTGCTTTTTGCACATCTAAACTATGTTACCTATCCTTAAACTACTTCAGGATTTGAATGGAT
GGTTAAAAAGTTGTCATAATACCAAAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396786] SGN-U573618 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198112 [Download][View] Facility Assigned ID: FA0AAD31DD10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.911 Expected Error Rate: 0.0129 Quality Trim Threshold: 14.5