EST details — SGN-E396925

Search information 
Request: 396925Match: SGN-E396925
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184215Clone name: TUS-44-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184215 is on microarray TOM1 spot ID 1-1-4.4.16.1 [Order] [Tomato Microarray Database]
See unigene SGN-U568929 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C25552 [cLEF-13-E18] Trace: SGN-T59662 EST: SGN-E245160 Direction: 5' Facility: TIGR
Clone: SGN-C184215 [TUS-44-D5] Trace: SGN-T198250 EST: SGN-E396924 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396925Length: 461 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396925 [] (trimmed) TTCAAGAAAGCTAAAGAACTTACTGTTCTTTGTGACGCTAAGATCTCTCTCATCATGCTATCAAGCACCAGGAAGTATCATGAGTACACAAGCCC
AAACACTACGACAAAAAAGATGATTGATCAGTATCAGAGTGCACTTGGAGTTGATATCTGGAGCATTCACTACGAGAAAATGCAAGAAAACTTGA
AGAGATTGAAAGAGATCAATAACAAGCTAAGAAGAGAGATAAGGCAGAGAACAGGGGAAGACATGAGCGGACTAAATTTGCAGGAACTATGTCAC
TTGCAGGAGAACATCACTGAATCTGTTGCTGAGATTCGTGAACGAAAGTACCACGTGATCAAGAATCAAACAGACACCTGCAAGAAGAAGGCGAG
GAACTTAGAAGAGCAAAATGGAAACCTTGTACTTGACTTGGAAGCAAAATGTGAAGATCCAAAGTATGGTGTTGTGGAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396925] SGN-U568929 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198251 [Download][View] Facility Assigned ID: FA0AAD32CB03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.933 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5