EST details — SGN-E396957

Search information 
Request: 396957Match: SGN-E396957
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184307Clone name: TUS-44-H1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184307 is on microarray TOM1 spot ID 1-1-8.4.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73252 [cLER-3-P15] Trace: SGN-T92417 EST: SGN-E277529 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E396957Length: 654 bp (846 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E396957 [] (trimmed) TTCCTTGTCTACTTCTACTTCTTTTTCTCAATATTAAATGTGATCCTCATTTATAGTACTCATCACAAACTTTCTTAGTAACAATTCAATAGTCC
AATTTTTCCTATTCTTGATCCTCCTCTCAACTCCAAATACCAAAAAAATAAAATTTAGAGGATAAAAAATGGAGGTAGCAAGAGTTCATGAAGGT
TCTAACAATGGCTTTATACTTCCAAATGAAATTCTTCCTCCTACTTCTAATTGGATATCTAATTCTTCCTCCATTTTCCATGGCTCTGTATCGAT
GGTAAATTTCGATCAAGATCGAGTACAGAAGTCTAAAAAGAGGTCATTTTTAGCACAACTTGATCAAGACGACAGTAGTAGCAATGATGACAATT
ACAATTATCATCACCAAAGTGAAAAGAAAAGACGATTGTTACCAAAACAAGTTGAGTATCTTGAGAAAAGTTTCGAGGTAGAAAACAAGCTTGAA
CCTGAAAGGAAAGTACAATTAGCTAAAGAAACTGGATTGCAGCCTAGACAAGTTGCTATTTGGTTTCAAAATCGACGAGCACGATGCAAAACGAA
ACAAATTGAAAAGGATTATGATGTCCTTAAAGCTAGCTTTGATGATTTGAAGACTCAATATGATTGTCTCTTCAAAGAGAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396957] SGN-U583759 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198283 [Download][View] Facility Assigned ID: FA0AAD32CD01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5