EST details — SGN-E396993

Search information 
Request: 396993Match: SGN-E396993
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184425Clone name: TUS-44-L23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184425 is on microarray TOM1 spot ID 1-1-2.4.16.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E396993Length: 673 bp (823 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E396993 [] (trimmed) CTGATATTAAATTTTCTAAGGATGGAAGATACATACTCAGCCGTGACTATATGACCCTAAAGCTATGGGACATAAATATGGATTCTGGTCCAGTG
TCAACCTTCCAGGTTCATGAATATTTAAGACCAAAGCTATGTGATTTATATGAGAATGACTCCATCTTTGACAAGTTCGAGTGTTGCCTTAGTGG
TGATGGGCTGCGAGTAGCTACTGGTTCTTATAGTAATCTTTTCCGTGTCTTTGGTTGTGCTGCGGGCACTACTGAAGCAACTACACTGGAAGCTA
GCAAAAACCCCATGAGAAGACAAGTACAGACTCCTTCAAGACCTTCCAGGTCCCTGAGCAGTAGCATAACACGTGTTGTCAGGAGAGGTTCAGAA
AGTCCAGGTGTTGATGCAAATGGAAATTCATTTGATTTCACAACGAAGTTGCTCCATCTAGCGTGGCATCCAACCGAAAATTCAATTGCCTGTGC
CGCTGCAAACAGCTTGTATATGTATTATGCATAAGTGTTAACAGGAGGAATGTAGTTTCTTGGATAGCATTTTTTCAGGTTGCTTTTTTAAGAAA
CGTTTTCTTCAGAAGCAGCTTGAGGTTCTACCATTTCACTTCCAGGTGCCTCCCCAACCTGTAACATGCATGGTCCAAAAATGGATGAAAAACTC
CAAACAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396993] SGN-U567284 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198319 [Download][View] Facility Assigned ID: FA0AAD32CF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5