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EST details — SGN-E397045

Search information 
Request: 397045Match: SGN-E397045
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184228Clone name: TUS-44-D18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184228 is on microarray TOM1 spot ID 1-1-7.4.16.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77826 [cLES-3-G21] Trace: SGN-T97759 EST: SGN-E284738 Direction: 5' Facility: TIGR
Clone: SGN-C184228 [TUS-44-D18] Trace: SGN-T198372 EST: SGN-E397046 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397045Length: 396 bp (871 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397045 [] (trimmed) AATGAAATTTATTTCATTAATCGTGAAGGATATACAAAATACATGTAGAACTTTTATATATGAGTAGGATTAAAAGTTAGCTCGATTTCTTTTAC
TAACTTTAAGATAGTACGTACTATGAAATCAATTTAGATCGTGATTTATTATTTTATTATAGTAATGATGATATATGACACTTTTTTTAAGTTTA
GCAGTTGACAAATTCATAGTTAACATTAAGGTTTCCCCTCTGATAGCCCAATCCATTAATGGCCAAGTCGGGTGAAAACGTTTACATCCAAATCA
AGCCCTCCGTTTCTGCATTGATCGACTATTCTCACTGTTTCTTGTGTTCCTGTTCCTGTGTTGGTCACCCTCAAGCATCTACCGCATGAAGCTTG
GCCCGTAGGTCCAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397045] SGN-U579235 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198371 [Download][View] Facility Assigned ID: FA0AAD32DB09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0133 Quality Trim Threshold: 14.5