EST details — SGN-E397338

Search information 
Request: 397338Match: SGN-E397338
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184611Clone name: TUS-45-D17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184611 is on microarray TOM1 spot ID 1-1-8.4.14.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77158 [cLES-20-C12] Trace: SGN-T102203 EST: SGN-E290524 Direction: 5' Facility: TIGR
Clone: SGN-C184611 [TUS-45-D17] Trace: SGN-T1839 EST: SGN-E378636 Direction: 5' Facility: Giov. Lab
Clone: SGN-C184611 [TUS-45-D17] Trace: SGN-T198665 EST: SGN-E397339 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397338Length: 745 bp (851 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397338 [] (trimmed) ACACAAAGAGTGTTTAAACATTTTCATTAAAAAAAGTTTCAGGTACACAATTCAATTTCAATGTTGGAACAAAAGAATGAAATAATAAGAGTTAC
AAAATGTCATCTCTCGTTTTCTTTGCCTTCTAAGGACTAATATAATCAATCTTATGATAAGAGCATGCACAATTTTGAGCACCAATATCCTCCCC
AACACAAGGAGCCTCTGCTTTTCCATCTCGGTACCATTGTTTTCTTTGTTGAACTAGTTCACTGACGAAATTGTCAAGCATTTCTCGGGTGATGC
CTGGCATAACAATAACATGTGCCATATCTTTGACGCATGAAAGTTGCCAACGACGCACAAATTCATGGTCACGAGGCCTTTCAAGTACAACTATG
ATGCTAAGCTCATTTAACATGACACTTATTCCTGCTTGTTGAAGGCGATTTTTCAAATATTTGGCATTGTCGAGACATCTTTTAACATCCTTTTG
AAGTCCAACTTGACCTTTTGCGCTTAAGCTATACCATAAGAAAATTGGAGTCAAACCGTTACGACTACCAGAAATAGTGGCATCGACAGAAGCAA
TGTATTCCACATTTGTTGAGAGATTATTGATGTAGCTTTTTCTTGTTATTTGGACACCACAAGGCATTGGGCATCCTAAGAACTTGTGACCAGAA
ATTGTGACACTTCCCATTGGCTTCTTGAAACTAATCATATTGTTTATAAAAGGGGTCATAAGACCACATAGTGCTGCATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397338] SGN-U577168 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198664 [Download][View] Facility Assigned ID: FA0AAD33CB09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5