EST details — SGN-E397383
| Search information |
| Request: 397383 | Match: SGN-E397383 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184745 | Clone name: TUS-45-J7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184745 is on microarray TOM1 spot ID 1-1-2.2.14.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82165 [cLET-1-B6] | Trace: SGN-T102494 | EST: SGN-E292220 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184745 [TUS-45-J7] | Trace: SGN-T198710 | EST: SGN-E397384 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E397383 | Length: 159 bp (969 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E397383 [] (trimmed)
AAAGAATTGATCAGAAAATTAAATAGAGATATTTTTGTACATACTAGGTTAAGTCTCTACATGCATAATATATTTATATTAAACTAGCGGGGGGT
AATGCCCAATTTTTTATATAATAAAAAAAATCTTTTGACTATTACCCCGGGGCGGGGGGGAACG
AATGCCCAATTTTTTATATAATAAAAAAAATCTTTTGACTATTACCCCGGGGCGGGGGGGAACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397383] | SGN-U594608 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T198709 [Download][View] | Facility Assigned ID: FA0AAD33CE04FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.731 | Expected Error Rate: 0.0149 | Quality Trim Threshold: 14.5 |
Working
