EST details — SGN-E397668
| Search information |
| Request: 397668 | Match: SGN-E397668 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185026 | Clone name: TUS-46-E24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185026 is on microarray TOM1 spot ID 1-1-1.1.11.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C20611 [cLED-30-B13] | Trace: SGN-T56350 | EST: SGN-E242420 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185026 [TUS-46-E24] | Trace: SGN-T196583 | EST: SGN-E395257 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E397668 | Length: 139 bp (933 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E397668 [] (trimmed)
CATGGTAATCTTAAAAATTATACATATGATACTAATTAAAGATTACAAGTGTTTCTTCTTCTAATGAAATCTTAATATATTTATTCATTACGGAC
ATGATATATCTAAAAAAATTACAAAGGTTGTTGGTCCCCCTCCC
ATGATATATCTAAAAAAATTACAAAGGTTGTTGGTCCCCCTCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397668] | SGN-U576878 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T198994 [Download][View] | Facility Assigned ID: FA0AAD34BC12FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.808 | Expected Error Rate: 0.0091 | Quality Trim Threshold: 14.5 |
Working
