EST details — SGN-E397734

Search information 
Request: 397734Match: SGN-E397734
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185233Clone name: TUS-46-N15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185233 is on microarray TOM1 spot ID 1-1-2.2.12.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75439 [cLES-14-B19] Trace: SGN-T100650 EST: SGN-E286829 Direction: 5' Facility: TIGR
Clone: SGN-C185233 [TUS-46-N15] Trace: SGN-T199113 EST: SGN-E397787 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397734Length: 380 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397734 [] (trimmed) CACGAGACAACATGATTTTGGAATACAAATGAAAAATATATATGCAGATGAAGAAAAATTACTAGAAGAGAATGGACTTAACTCAAGTGTAGTTG
CATTTGTAGAAAAGATCATTCTCTATTTAATTTTTTTTTTGTCCCTATTATATCTTATATTTTGTTTCCATTTTCTCATCATATAATTAAGTTAA
GTGTGGCATGATTGTGAAGTGTAGGAGAGCTTAAAAGGGCCAAAGTCTTATTCATTGCAACTTCTTCTCTTCATGTTTTTGGCCCTCTTATCTCC
AAATTGTATGTTGGTTGCTTTAGCTCAGATAGAGCCAGCAATATCTTGTTTCTATTGGAAAAAAAAATATAACATGGTGATTTAAATTTTGTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397734] SGN-U581270 Tomato 200607 Build 2 79 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199060 [Download][View] Facility Assigned ID: FA0AAD34CG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.906 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5