EST details — SGN-E397777

Search information 
Request: 397777Match: SGN-E397777
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185141Clone name: TUS-46-J19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185141 is on microarray TOM1 spot ID 1-1-6.2.11.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70500 [cLER-15-B1] Trace: SGN-T95357 EST: SGN-E282837 Direction: 5' Facility: TIGR
Clone: SGN-C185141 [TUS-46-J19] Trace: SGN-T199046 EST: SGN-E397720 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397777Length: 447 bp (878 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397777 [] (trimmed) AACATTTGATACTTAGATTAAATATTGGTCCCATCATTGGGGGGGATTAACAAGGCACACAAGCTATGGCGCAAAAACCTCACACACTTGTTCTA
GAAGTAATATAAGAGAGAAAATAAGGACGTGTTCGAGTTCATGGCTGAATGGTTAAAGCGCTCAATTTGTACTAGCGCAACTAGAAAGAGATTCT
TTAACCAAAAAGAATTCGATTCAGAACACTTAAGAGGAAGCACTTCAACCATCAATTTTCCGCTTCTTCTTTGATTTTTGATCTTGAGAGTGATC
GAAGGATCCTGAAGAGGTTAATGCACTACGACCACTTTTGCCTGAATCTTGAACAGATTGGTTATTGGATTTTGCAGGGCCGCCATCACTGTGTT
TTCTCTTGGTAGATTTGGATGAACTCTCCGATCGCATAATACTCCGTGTCCTAGTACTTTGAGTAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397777] SGN-U571864 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199103 [Download][View] Facility Assigned ID: FA0AAD34CE10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5