EST details — SGN-E397811

Search information 
Request: 397811Match: SGN-E397811
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177974Clone name: TUS-27-P4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177974 is on microarray TOM1 spot ID 1-1-5.4.6.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64355 [cLEM-5-O19] Trace: SGN-T85009 EST: SGN-E271204 Direction: 5' Facility: TIGR
Clone: SGN-C177974 [TUS-27-P4] Trace: SGN-T193050 EST: SGN-E391724 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397811Length: 614 bp (845 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397811 [] (trimmed) GAATCGAAGACTGTTATTTAAAGTAAGTGTCTTCCCCAGCCAAGAAAATGGCTTAATTCAGTTTTAGAAACATAGAGATTCACATGCATTGGAAG
TCATATGACATATCTTCCCTCACTTTTTAACATTTCTCTACAAATCATAAAGCTCATTGCAATAGAGAAGTTATCAACTAGTTGATAACAGAAAG
AGTTGGCAATAACAGATAGAAGGCCAACTAATAACAAAGCCTTCATGCTGATGAGAACAGCAGTCGGCTTAGTAGTGTTGTGACCAGTTAGCAGC
ACTACCCACTCTGGGCATGCCTGAATCCACTTTCTTAGACTCTGGGTCCACCTTAAAATTTGCTCCACACACCTCGCCTGAGCTGTCCACCCTCG
GTACTGATTTCAACTCATTGCGTGGGTGTTCATAACTCCTCAAGCCACCAGAAGATGTGAAAAAGCACCCTTTGGGAAATGGTGAAAAGGATTTC
CCACAGCCTTGTTTCACAATGTCACCATCATCTGAGAGAACTAGGTGGCCTTCAGAAATCAGTACCCCAAAAAAAGGGCACACAGCCATCAACCA
TCAAAAGCTAGAAAGGTACTCTTAGAAGCGCAATCCATAAAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397811] SGN-U577532 Tomato 200607 Build 2 85 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199137 [Download][View] Facility Assigned ID: FA0AAD15DH02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5