EST details — SGN-E397831

Search information 
Request: 397831Match: SGN-E397831
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176540Clone name: TUS-24-D10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176540 is on microarray TOM1 spot ID 1-1-7.4.9.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26962 [cLEF-42-B9] Trace: SGN-T60606 EST: SGN-E247562 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397831Length: 609 bp (874 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397831 [] (trimmed) CCCCCCCCCCCCAATTTCTTTGTTTTGTTTGTTTCCTTTTTGACAATGTTGACGGCTGGTTGGAAGCTGTGGCCATTTTTTCATCTAATTACATA
TGGTGTAATTCCGGTTGAACAAAGGCTTCTTTGGGTTGACTGTGTAGAACTCGTTTGGGTGACAATACTCTCAACTTATTCAAATGAGAAATCAA
AATCTAGAGTCTCTGAGGTGATCGTAGAAGCAGAGGCGCAACCTCCCTCAGTAAGCCCACCACAGGAGTAAATGAATCGAAGAGCAATGACACAA
CCAAAATTTGAGGAAATGTATAGCTTTGAGGTGATATAGCTGCAGATACTTGCTGTACCATACGCTCAGTAAACGTCCTCTGAGATACTCGTTTA
TAATTTATGCATACAGCACGCAGCCCTCCTTCCTCCGCGTATGTACACAAATTCTTTTATAGTAATTGTAAAATAGTGCAATCGCGACCTCTAAC
GTTCATGCTGAAGTTTCTGTTGAAACTTCCATAATAGAAGTATATAGCTTATAACATAATATTAACTATCTTTGAAGGATCATGAAATATGAATG
AAGTGAACTGGTGGTTCAAGCCTGAACAACCAAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397831] SGN-U563321 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199157 [Download][View] Facility Assigned ID: FA0AAD12DB05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5