EST details — SGN-E397881

Search information 
Request: 397881Match: SGN-E397881
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180507Clone name: TUS-34-I17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180507 is on microarray TOM1 spot ID 1-1-8.1.19.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27050 [cLEF-42-G18] Trace: SGN-T60759 EST: SGN-E247715 Direction: 5' Facility: TIGR
Clone: SGN-C180507 [TUS-34-I17] Trace: SGN-T193500 EST: SGN-E392174 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397881Length: 686 bp (842 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397881 [] (trimmed) AACACTTCTCTGTTGAGGGGCAACTTGAATTCAAGGCAATCCTCTTTGTACCTAAGAGGGCTCCATTTGATCTATTTGACACCCGCAAGAAGATG
AACAACATCAAACTTTATGTCAGGAGGGTGTTCATCATGGACAACTGTGAGGAACTTATCCCTGAGTACCTTGGATTCGTGAAGGGTGTTGTTGA
CTCTGATGATTTGCCCCTCAATATCTCCCGTGAAATGCTGCAGCAGAACAAGATTCTCAAGGTCATTAGGAAGAACCTCGTGAAGAAATGTATTG
AGATGTTCAATGAGATTGCAGAGAACAAGGAGGACTACAACAAGTTCTACGAGGCTTTCTCAAAGAACTTGAAGCTGGGCATTCATGAAGATAGC
CAGAACAGGGCTAAGTTGGCTGACCTCCTTCGATATCAGTCAACCAAGAGTGGTGATGAGCTGACAAGTTTGAAAGATTATGTAACCAGGATGAA
GGAGGGTCAGAAAGACATCTACTACATCACTGGAGAGAGCAAAAAGGCAGTTGAAAATTCACCATTCTTGGAACGCCTAAAGAAGAAAGGATATG
AAGTACTCTTCATGGTTGATGCCATTGATGAATATGCTATTGGGCAACTGAAGGAATATGATGGTAAGAAACTGGTTTCTGTTACAAAGGAGGGA
CTGAAGCTCGATGACCAGACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397881] SGN-U580107 Tomato 200607 Build 2 103 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199207 [Download][View] Facility Assigned ID: FA0AAD22AE09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0021 Quality Trim Threshold: 20.5