EST details — SGN-E398205

Search information 
Request: 398205Match: SGN-E398205
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176465Clone name: TUS-24-A7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176465 is on microarray TOM1 spot ID 1-1-2.1.9.10 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C176465 [TUS-24-A7] Trace: SGN-T192935 EST: SGN-E391609 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E398205Length: 505 bp (885 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398205 [] (trimmed) AAGCTCAAGTAAAAATAAAAAGGCCAATCACAACTTTTTTTTTGGGAACAAAGCTAATAAAAAAGTCTAAAAAACACCTCATATAGTCAAACTAG
TAGTACTTAGTAATCCTATGTACAACATATTATTGTTCAAAAAAACTTAGCAAATGCCTTTGGAGTTTGGACAACTAGAGTCGTACGAAATCTAT
CAAAAATAGTTTCTCTACCTATACAGGATAAAGACAAAACTGGGCGCTTGCTTGTGTACGTGCGTACATAAAATTATCTTCAAACTCCACTTGGG
GGATTTATACTGATCTAAAGTAGGATCGAGCCAAATCTTGTAACCTAACCACTCAATATTGCCAGAACCAACAAGGTTGATCTTCAATTTGGAAA
CTCAAATTGCGTGAATTCGCTTGAATTTGATCTCCAATTTCGGGGAATATAAAAAGTTCTTGCTTAGGTTGGCATCTTCCTCTCCAAAAAAATCC
AAATGGCTCTTGTTCAAATACATTTGAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398205] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199531 [Download][View] Facility Assigned ID: FA0AAD12AA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.943 Expected Error Rate: 0.0237 Quality Trim Threshold: 12.5