EST details — SGN-E398298

Search information 
Request: 398298Match: SGN-E398298
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183060Clone name: TUS-41-D2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183060 is on microarray TOM1 spot ID 1-1-7.4.3.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E398298Length: 341 bp (919 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E398298 [] (trimmed) ATTCGCTTGCGGGATGTCTGTAGCAGGATAATGTAAACCAAGGTAAGGCTCGAGGCCAGGCTTTGTGATCTCAGACACCACCTCTCCATGATCAT
CCTCGTGAAACTTATATCCCATCACCCTGTCATAACCTGTGAGTTCAAAAACCTCCTGAACCATTGTGTCACAGAGTCTTTCCATACTGCCACTG
GGCAAGGACTGCAAGCGAGTAATGGCTTTGGCTGCTAGTTTATATGACTGCAGGGCCCCTGCAGCAGTCATGGGTACTTCATAGGGCTTCACAGG
CTCAAAATCAAGGATTAAGCTACCTGTAACCCTATGAACAATTGCGTAAAACGGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398298] SGN-U582122 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199624 [Download][View] Facility Assigned ID: FA0AAD29DB01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Vector found but pattern inconsistent with a normal insert
Passed all screens and filters
Sequence Entropy: 0.991 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5