EST details — SGN-E398377

Search information 
Request: 398377Match: SGN-E398377
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180590Clone name: TUS-34-M4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180590 is on microarray TOM1 spot ID 1-1-5.1.19.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C39488 [cLEG-4-F19] Trace: SGN-T64724 EST: SGN-E250110 Direction: 5' Facility: TIGR
Clone: SGN-C180590 [TUS-34-M4] Trace: SGN-T196323 EST: SGN-E394997 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398377Length: 491 bp (847 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398377 [] (trimmed) AAGTGTCCAAGTAGAGAGCAAACCTAAACTGGACGTCCGCCTCACTGACTTGAAACTTGTTCTGGGACCAGAACTGAGGATAGTTTATCCTCTGA
TCCTCAATTTTGCTGTCAGTGGAGAACTTGAGTTAAATGGCGTTGCTCATCCCAAGTCGATAAAGCCTAAAGGCATATTAATGTTTGAGAATGGA
GATGTCAATCTTGTTGCAACACAGGTGAGACTGAAGCGAGATCATCTAAACATAGCCAAATTTGAGCCTGATAATGGACTTGATCCAATGCTAGA
CTTGGCTTTGGTTGGATCTGAGTGGCAATTCAGGATACAAAGCCGTGCTAGCAAATGGCAGGATAAGTTAGTGGTAACATCAACACGTTCCGTGG
AGCAAGATGTCTTGTCACCTACTGAGGCTGCTAAAGTGTTTGAGAGTCAGTTAACTGAATCCATTTTAAAAAGGTGATGGCCAACCTGCCTTTAA
CAATCTTGCCACTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398377] SGN-U577507 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199703 [Download][View] Facility Assigned ID: FA0AAD22BG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0068 Quality Trim Threshold: 14.5