EST details — SGN-E398624

Search information 
Request: 398624Match: SGN-E398624
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184026Clone name: TUS-43-L8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184026 is on microarray TOM1 spot ID 1-1-1.4.19.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22824 [cLED-3-J17] Trace: SGN-T49023 EST: SGN-E228375 Direction: 5' Facility: TIGR
Clone: SGN-C184026 [TUS-43-L8] Trace: SGN-T1808 EST: SGN-E378628 Direction: 5' Facility: Giov. Lab
Clone: SGN-C184026 [TUS-43-L8] Trace: SGN-T197972 EST: SGN-E396646 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398624Length: 478 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398624 [] (trimmed) CCATTAAAATAAAACTTCATTATAAACAGGAAGGGATACATTGTTACATGCCAATCTTATTAAGTATGCAACTAAAGTAGTTAACTTTTGTATTC
TCCATTTTCCATGTAAAATGCCAAAGGCAAATTACTCAAACAGCTTAAAATATCTTGCCTATATTCTTGCCACCAATTCATGAAGCTACTATGAA
GCTGGAAAATATCAAAGGATACTGAATAACTCCTTATCATATTCATAACATATCCCCCAAAATTAACCAAATACTCCCTTGCATTTTCCTTCTCT
TGTAAACTCCCTTCTCTCAGTCTTTTGGAATTTATAATAGCTTCCTCCAAATATGTCCAAAAGCACGAATCTTCGGTGAGGCTAACACACTTCCT
TCAATCGTTACCACTTCCAAACGGGTTGTCTTCTCTCCTCCATTCCTCCAACTTTTTAAAGTGCTCGGATCTACCAAGATTTACATAGTCGGTGT
TCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398624] SGN-U574048 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199950 [Download][View] Facility Assigned ID: FA0AAD31DF04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.930 Expected Error Rate: 0.0069 Quality Trim Threshold: 14.5