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EST details — SGN-E398648

Search information 
Request: 398648Match: SGN-E398648
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184265Clone name: TUS-44-F7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184265 is on microarray TOM1 spot ID 1-1-2.2.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72147 [cLER-1-E7] Trace: SGN-T91834 EST: SGN-E280280 Direction: 3' Facility: TIGR
Clone: SGN-C184265 [TUS-44-F7] Trace: SGN-T198268 EST: SGN-E396942 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398648Length: 510 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398648 [] (trimmed) CACACATACTCGATATACTAAAAAGATTAATTATTTCAAAGTAATTTGATATGTAAAATTTACAGATCTCTGTGAAATCTTCCTTGCCGTAACTT
CTGCTCATTAAGTCATTCTACTTCTCTCCCTTGCCTTGGTTTCCACAAGTACTTGCTTCTCCGCAAATGCGCTTCTGCAAATGCTCCAACCTAGC
CTCTCGCTGCATTGAAAATGGTCTGTCAATTGTGTTGGCTTCAATTGCCTCTGTTGCGGAGCTCTGATGTACATTTCCTATAGGAGGGATATCTA
ACATACCGTTTTGCATTCTACAATCATGGTTGGGCATATGACCATTTTCAGGCGCTGTATAGTTCAGGTCATCATGTTCAGGGACAGCAGCGTCT
GCTGATGAGTCGAAAGGACTACTAGTGAAAAATGGCATCATTACTGTCGATAATCTCAAACATAGCTTGGAATAAAGGATTCACCCCACTAACTC
TTTTAACAGTTTCTTCACCCAGCATCACCTTTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398648] SGN-U572085 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199974 [Download][View] Facility Assigned ID: FA0AAD32CC04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0115 Quality Trim Threshold: 14.5