EST details — SGN-E398846

Search information 
Request: 398846Match: SGN-E398846
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183031Clone name: TUS-41-B21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183031 is on microarray TOM1 spot ID 1-1-4.2.3.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C67384 [cLEN-18-I10] Trace: SGN-T91093 EST: SGN-E275664 Direction: 5' Facility: TIGR
Clone: SGN-C183031 [TUS-41-B21] Trace: SGN-T195168 EST: SGN-E393842 Direction: 5' Facility: INRA
Clone: SGN-C183031 [TUS-41-B21] Trace: SGN-T195811 EST: SGN-E394485 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E398846Length: 408 bp (849 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398846 [] (trimmed) CTTAAATCTTCAAGCTCTGAATTGGACTTCGATCGACCCAATCTTGAAGATTATCTTCCTACTGGATCCATACAAGAACCCCATGGAAAGCTTCG
ATTGCGTGATTTGCTTGATATATCTCCCACTTTGACTGAGGCTGCTGGTGCAATTATTGACGATTCTTTCACCCGATGCTTCAAGTCAAATCCAC
CAGAACCTTGGAACTGGAACATCTATTTGTTTCCTTTATGGTGCTTGGGAGTTGTTGTTAGATATGGAGTTCTTTTTCCTATAAGAGTCATTGTC
TTGACAATAGGATGGATAATATTTCTGTCTTGCTATATCCCCGTGCATTTATTTCTGAAAGGGCACGATAAATTCTTGAAAAAGCTAAAGAGGTG
CCCTGTTGGTACTAATCTGTATATTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398846] SGN-U577121 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200144 [Download][View] Facility Assigned ID: FA0AAD29CA11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5