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EST details — SGN-E399207

Search information 
Request: 399207Match: SGN-E399207
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183725Clone name: TUS-42-O19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183725 is on microarray TOM1 spot ID 1-1-6.3.1.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34186 [cLEG-30-A3] Trace: SGN-T69001 EST: SGN-E255275 Direction: 5' Facility: TIGR
Clone: SGN-C183725 [TUS-42-O19] Trace: SGN-T199411 EST: SGN-E398085 Direction: 3' Facility: INRA
Clone: SGN-C183725 [TUS-42-O19] Trace: SGN-T199647 EST: SGN-E398321 Direction: 5' Facility: INRA
Clone: SGN-C183725 [TUS-42-O19] Trace: SGN-T200263 EST: SGN-E399206 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399207Length: 643 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399207 [] (trimmed) GGAAGAGTCCAGTTGAAGCGAATAGAGAACAAAATTAACCGTCAAGTTACCTTCTCGAAACGTCGATCTGGTTTGCTGAAGAAAGCCCATGAGAT
CTCTGTGCTTTGTGATGCTGAGGTTGGTTTGATTGTTTTTTCTACTAAAGGAAAACTCTTTGAATATGCCAACGATTCCTGCATGGAGAGGATAC
TTGAAAGATATGAAAGATACTCATTTGCTGAGAAACAGCTTGTTCCTACTGATCATACCTCCCCGGTAAGCTGGACCCTTGAACATGCAAAACTT
AAGGCCAGACTTGAGGTTCTGCAGAGGAACCAAAAGCATTATGTGGGAGAAGATTTGGAGTCCTTAAGTATGAAGGAACTTCAGAATCTGGAGCA
CCAGCTTGATTCAGCTCTTAAACACATTCGATCAAGAAAGAATCAATTGATGCATGAGTCCATTTCTGTGCTTCAAAAAAAGGACAGAGCATTGC
AGGAGCAAAACAACCAGCTTTCGAAGAAGGTGAAGGAGAGGGAGAAAGAGGTGGCACAGCAAAATCAGTGGGAAATCAACTCATCTTCATTTGTT
TTGCCACAACAACTGGACTCTCCTCACCTTGGGGAAGCATACCAGAGTACTAATGTAATAGATAATGGGGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399207] SGN-U578128 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199647 [Download][View] Facility Assigned ID: FA0AAD30AH10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5