EST details — SGN-E399358

Search information 
Request: 399358Match: SGN-E399358
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183493Clone name: TUS-42-F3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183493 is on microarray TOM1 spot ID 1-1-6.2.2.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34188 [cLEG-30-A5] Trace: SGN-T69002 EST: SGN-E255276 Direction: 5' Facility: TIGR
Clone: SGN-C183493 [TUS-42-F3] Trace: SGN-T199682 EST: SGN-E398356 Direction: 3' Facility: INRA
Clone: SGN-C183493 [TUS-42-F3] Trace: SGN-T199682 EST: SGN-E399591 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399358Length: 691 bp (910 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399358 [] (trimmed) CTGGTGGAACTGAGAATCATCTCGTGCTGGTTAACTTAAGAAATAAGGGTATTGATGGATCTAGAGTTGAGAAGGTTTTAGAGTCGGTGCATATT
GCAGCCAATAAGAATACTGTGCCTGGTGATGTATCTGCCATGGTACCTGGTGGCATTCGCATGGGCACCCCAGCTCTCACTTCTAGAGGTTTTGT
TGAGGAGGATTTTGTCAAAGTGGCTGAATATTTTGACGCTGCTGTGAAGTTGGCCCTTAAGGTCAAGGCTGAGACCAAAGGAACGAAGTTGAAGG
ACTTTGTGGCAACTTTGAGTTCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGACGTTGAGGACTATGCCAAACAATTCCCTACT
GTTGGTTTCGAGAAAGAAACAATGAAATACAAGAATTGAGCTTGGATCTAGTGTTGAGGCAGCGAGGCTTCCTTTTTCTTCACTCTCTGTAATTT
TGCTGTCTTTGGCTGCTCGAGTCAGAAGACATTTTTCTCCAATGATGTTAGAACATTTGTCTTTCTGAATTCACCTGCAGTGCGCGGAAAAGAGT
TACACGGATCACATTTCATTACATTTGTTTGATTTTTCAAATCGAAGTTACCATCAGATGTAATTTTATGCTACGTTCACATGTGATGTATAACA
GGATAANGGATAAGATCTTATGCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399358] SGN-U579002 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200347 [Download][View] Facility Assigned ID: FA0AAD30CC02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0133 Quality Trim Threshold: 12.5