EST details — SGN-E399521

Search information 
Request: 399521Match: SGN-E399521
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172765Clone name: TUS-14-G3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172765 is on microarray TOM1 spot ID 1-1-6.3.20.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172765 [TUS-14-G3] Trace: SGN-T195117 EST: SGN-E393791 Direction: 3' Facility: INRA
Clone: SGN-C172765 [TUS-14-G3] Trace: SGN-T195118 EST: SGN-E393792 Direction: 5' Facility: INRA
Clone: SGN-C172765 [TUS-14-G3] Trace: SGN-T195304 EST: SGN-E393978 Direction: 3' Facility: INRA
Clone: SGN-C172765 [TUS-14-G3] Trace: SGN-T195304 EST: SGN-E398932 Direction: 3' Facility: INRA
Clone: SGN-C172765 [TUS-14-G3] Trace: SGN-T199540 EST: SGN-E398214 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399521Length: 540 bp (866 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399521 [] (trimmed) TAATGTTGAGGATGCTAATGGCCAGCGGCCAGCTGATGTGATTGTTGTTCCACCAAAGCTTCCTGGTACTAGAGCTTCTCTTGAAAAACTGCTTC
TGAATAATTCATCTGATGGCTCAGTTGGTGACTGCAAATTGACAGTATCTGTGGCTACTTCAGATGCATCCTCTCCCATTCTCTCCTCATCACCA
GAAAATGGATCTCCTTGTTCATCATTGGAGTCCTCGTCTTCCCCTATGGCATCGAAGTTCAGTGACCTCCCTGCTAATTCTGCACGAGAGAAAAA
AGAGTATCCAATAGATCCGTCTCTCCCTGACATCCAGAATAGTATATATTCAACGGATGAGTTCCGCATGTTCTCTTTTAAGGTTCGGCCATGTT
CTAGGGCCTATTCACATGACTGGACAGAGTGCCCATTTGTCCACCCTGGAGAGAACGCTCGTAGAAGAGATCCAAGGAAGTACCACTATAGCTGT
GTGCCTTGTCCTGAATTTCGCAAGGGTGCATGCCGACGCGGTGATATGTGCGAATATGCCTCATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399521] SGN-U566806 Tomato 200607 Build 2 58 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195118 [Download][View] Facility Assigned ID: FA0AAD2AD02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5