EST details — SGN-E420038
| Search information |
| Request: 420038 | Match: SGN-E420038 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C272798 | Clone name: STM-30-J11 |
| ||
| Library Name: STM | Organism: Solanum tuberosum |
Tissue: mixed tissues
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C272798 [STM-30-J11] | Trace: SGN-T272176 | EST: SGN-E420039 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E420038 | Length: 709 bp (974 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E420038 [] (trimmed)
GGCATTAGTACAGTAAAATTAATGGGCTGCCGTGATTGGGTCCGCTGACCCGTTTTCCTGCCCTCTGTTCATCAAGCTCTGGCAATGCCGTCTCC
GCTTAATCCCAGTTTGAAAAGGAAAAGGAAAAGGAAAAGGAATGAGCGGGACACGAATTATAAGAGGGAAAGGATGAAGCTAATTCACTGGACCT
TCTTCTTCAACTTATAACAATTATGGCCACTTCCGATTCTCAGCGTCGCCGCGTTTTTGTTGGGAATATACCATATGATGCTACTGAGGAGCAAC
TAATGCAAATCTGTGAGGAAGTTGGACCAGTTGTTTCCTTCAGATTAGTGATTGATAAAGAAACTGGGAAACCAAAAGGTTATGGATTCTGTGAA
TACAAGGATGAAGAGACTGCGTTAAGTGCTCGTCGCAACCTTCAGAGGTACGAGATAAATGGTCGGCAGCTAAGAGTTGATTTTGCTGAAAAAGA
TAAAAGTTCGGACAGAAATCGTGAACAGGGTTGCGGCGGACCTGGTATGACTGCGAATGTTGATCACCAAAAATACATTGGGGGACCAGCTGTCC
CTGTGGATTCTGCACTTCAGCAGCCATTAGGCATGTCAGTAGCTATGACTGCTGCATCTGTTATGGCAGGAGCTCTTGGAGCTGCTCAGAGTGGC
TGCTCATTCAGTCAGTCTGGGATAGATCCTTTAACACTACATAT
GCTTAATCCCAGTTTGAAAAGGAAAAGGAAAAGGAAAAGGAATGAGCGGGACACGAATTATAAGAGGGAAAGGATGAAGCTAATTCACTGGACCT
TCTTCTTCAACTTATAACAATTATGGCCACTTCCGATTCTCAGCGTCGCCGCGTTTTTGTTGGGAATATACCATATGATGCTACTGAGGAGCAAC
TAATGCAAATCTGTGAGGAAGTTGGACCAGTTGTTTCCTTCAGATTAGTGATTGATAAAGAAACTGGGAAACCAAAAGGTTATGGATTCTGTGAA
TACAAGGATGAAGAGACTGCGTTAAGTGCTCGTCGCAACCTTCAGAGGTACGAGATAAATGGTCGGCAGCTAAGAGTTGATTTTGCTGAAAAAGA
TAAAAGTTCGGACAGAAATCGTGAACAGGGTTGCGGCGGACCTGGTATGACTGCGAATGTTGATCACCAAAAATACATTGGGGGACCAGCTGTCC
CTGTGGATTCTGCACTTCAGCAGCCATTAGGCATGTCAGTAGCTATGACTGCTGCATCTGTTATGGCAGGAGCTCTTGGAGCTGCTCAGAGTGGC
TGCTCATTCAGTCAGTCTGGGATAGATCCTTTAACACTACATAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E420038] | SGN-U285751 | Solanum tuberosum | Build 4 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T272175 [Download][View] | Facility Assigned ID: STMEO54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |
Working
