EST details — SGN-C46552

Search information 
Request: 46552Match: SGN-C46552
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C46552Clone name: cLEI-12-P12
cartOrder Clone
Library Name: cLEIOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: whole seedlings
Development Stage: germinating seed

Microarray: Alias clone SGN-C185256 is on microarray TOM1: SGN-S1-1-3.3.12.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185256 [TUS-46-O14] Trace: SGN-T1883 EST: SGN-E378477 Direction: 5' Facility: Giov. Lab
Clone: SGN-C185256 [TUS-46-O14] Trace: SGN-T196596 EST: SGN-E395270 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E267799Length: 324 bp (849 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E267799 [] (trimmed) ACCCAAAAGAATTGAACATTGATCTTGAATAAATACATGTGCTTAATAATGTGGGTTATGAACTACCACATATTTATCAGAAATTATTCTCGATT
ATTGGCTAATGTGGTTATACAATATTCTTTTACCCTACAAGAACTATGCAAGGAGCACATGGAGATCTTTTTGCAAGTGCATTTAAATGGCAACC
GATTAATAGGTCGGATGGATATTATGCAACTGACTTGAGCAAGGCGTTCAACACTACTTCTTTTGTAGGCAAAGCTGGAATTGCTCCTCTCTCCA
TCACGGTCAATGCACCACAGGCATTAGCAAAACTAAGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E267799] SGN-U570882 Tomato 200607 Build 2 82 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T82218 [Download][View] Facility Assigned ID: TGSBV90TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0100 Quality Trim Threshold: 14.5