EST details — SGN-C46604
| Search information |
| Request: 46604 | Match: SGN-C46604 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C46604 | Clone name: cLEI-13-B24 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177603 is on microarray TOM1: SGN-S1-1-8.4.6.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177603 [TUS-26-P17] | Trace: SGN-T182529 | EST: SGN-E369915 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177603 [TUS-26-P17] | Trace: SGN-T182530 | EST: SGN-E369916 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268432 | Length: 680 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268432 [] (trimmed)
TTTTTTTTAGCTAGAACAAAAGTAAAGTACATACTAGCTAAAGTAGATATATGGAAATCTATATACAAACAACTGCGTCTCAATCCCAGACAAAC
TAAGGTTGTTTAAAGGAGAAATTCAACACGAGGACTTTACATTTCATTACTCATACAAGCAGACATAACGATTACAACACAAAATGGAGATGACT
AAAGAAGGAATGCGACTAGGGTCAACCATTTTAGTACTATATACTCTCTCAACCAAATACGCGTAACTTCAGAGTTCTGATGTGAACAAGACTCT
ACAACTTGCGCAAAATCAATGGAGCACCATGTTGAGGTTGGAGAGTGATGATTGTATGAGGAGCATGTGAATAAGATGGAGATAACTCAAGAGCA
TAGTGTTGTAAAATCATTGCTAGTGCCATTTTTGCCTCTAACATAGCAAAATTTTGTCCAATGCATATTCTTGGTCCCCAACTAAATGGAAAATA
TGCAAATTTACCTTTTGTTGCTTTATTAACTCCTTCACTAAACCTCATTGGATTGAACTCTTTTGCATCATCACCCCATATTTCATTATCATGTT
GCAAATAAATTGTTGGCAACAATAGTAACATCCCAACAGGCAATGACAAGTGCCCTAATTTTGTCTCTTTTTGTACTCTTCTACCAATCATAGTT
CCTGGTGGATATAAC
TAAGGTTGTTTAAAGGAGAAATTCAACACGAGGACTTTACATTTCATTACTCATACAAGCAGACATAACGATTACAACACAAAATGGAGATGACT
AAAGAAGGAATGCGACTAGGGTCAACCATTTTAGTACTATATACTCTCTCAACCAAATACGCGTAACTTCAGAGTTCTGATGTGAACAAGACTCT
ACAACTTGCGCAAAATCAATGGAGCACCATGTTGAGGTTGGAGAGTGATGATTGTATGAGGAGCATGTGAATAAGATGGAGATAACTCAAGAGCA
TAGTGTTGTAAAATCATTGCTAGTGCCATTTTTGCCTCTAACATAGCAAAATTTTGTCCAATGCATATTCTTGGTCCCCAACTAAATGGAAAATA
TGCAAATTTACCTTTTGTTGCTTTATTAACTCCTTCACTAAACCTCATTGGATTGAACTCTTTTGCATCATCACCCCATATTTCATTATCATGTT
GCAAATAAATTGTTGGCAACAATAGTAACATCCCAACAGGCAATGACAAGTGCCCTAATTTTGTCTCTTTTTGTACTCTTCTACCAATCATAGTT
CCTGGTGGATATAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268432] | SGN-U578999 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82493 [Download][View] | Facility Assigned ID: TGSBZ12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
