EST details — SGN-C46681

Search information 
Request: 46681Match: SGN-C46681
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C46681Clone name: cLEI-13-F23
cartOrder Clone
Library Name: cLEIOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: whole seedlings
Development Stage: germinating seed

Microarray: Alias clone SGN-C177622 is on microarray TOM1: SGN-S1-1-5.1.6.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177622 [TUS-27-A12] Trace: SGN-T182915 EST: SGN-E370540 Direction: 3' Facility: INRA
Clone: SGN-C177622 [TUS-27-A12] Trace: SGN-T182916 EST: SGN-E370541 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E268577Length: 438 bp (914 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E268577 [] (trimmed) GAATGAATGAAGGATGCAAATGGGTAGAGATGTTTGAAGATGTTCGTGTTGTAGTATTTTGTGCAGCCCTGAGTGACTATGATCAGATGTGGCTT
ACTCAGGAGGACTGTGGTAGCGGTACACTACTTCAGAACAAGATGATGCATATCAAAGAACTCTTTGAAACAATGGTAAGACATCCCTGTTTCAA
AGAAACCCCATTCGTTTTAATCTTGAACAAGTATGATCTATTCGAGGAGAAGATCATCGGTGTACCATTGGACTCTTGCGAGTGGTTCAGTGATT
TCAGTCCAGTATGGACTCACCATAATAACCTATCACTGGCAAACCAAGCATACTATTATATCGCAATGAAGTTTAAAGACCTTTATACTTCTATC
ACTGGTAAAAAACTATTTGTATGGCAAGCTCGGGCAAGAGACCGAGTTACAGTTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E268577] SGN-U569339 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T82638 [Download][View] Facility Assigned ID: TGSBY36TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0080 Quality Trim Threshold: 12.5