EST details — SGN-C46721
| Search information |
| Request: 46721 | Match: SGN-C46721 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C46721 | Clone name: cLEI-13-H4 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177630 is on microarray TOM1: SGN-S1-1-5.1.6.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177630 [TUS-27-A20] | Trace: SGN-T182989 | EST: SGN-E370614 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177630 [TUS-27-A20] | Trace: SGN-T182990 | EST: SGN-E370615 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268445 | Length: 644 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268445 [] (trimmed)
CGTGCACGTGCCATTGGGGTGGAGCTCGTTAGCTTTGATAAAGCCATTGCTTCTGCAGATTGTATCTCACTTCACATGCCCCTTACTCCTGCAAC
TAACAAGGTCCTAAATGATGAAACTTTTGCAAAGATGAAAAAGGGAGTACGAATTGTAAACGTTGCTCGTGGGGGAGTGATTGATGAACATGCTT
TGGTCAGGGCACTTGATGCAGGAATTGTGGCACAGGCGGCACTTGATGTTTTCACCGTGGAGCCACCAAAGGACAGTAAGTTGGTTCAACATGAG
AATGTGACTGCAACTCCTCATCTTGGTGCTAGTACTATGGAAGCTCAGGAAGGAGTGGCCATTGAGATAGCATAAGCTGTTGTTGGAGCTTTGAA
TGGAGAGCTTGCAGCTACTGCTGTCAATGCTCCAATGGTGCCTGCTGAGGTTCTCTCTGAGCTGAAGCCTTTTGTTGCACTGGCTGAAAAACTTG
GTAGACTTGCTGTCCAACTAGTGGCAGGTGGAAGTGGTGTGAAATCAGTGAAAGTAACTTATGGTTCAGCTAGAGGACCTGATGATCTTGACACG
AGATTGCTTCGGGCGATGATAACCAAGGGATTGATTGAGCCTATTTCCAGTTCTTTTGTGAACTTGGTAAATGC
TAACAAGGTCCTAAATGATGAAACTTTTGCAAAGATGAAAAAGGGAGTACGAATTGTAAACGTTGCTCGTGGGGGAGTGATTGATGAACATGCTT
TGGTCAGGGCACTTGATGCAGGAATTGTGGCACAGGCGGCACTTGATGTTTTCACCGTGGAGCCACCAAAGGACAGTAAGTTGGTTCAACATGAG
AATGTGACTGCAACTCCTCATCTTGGTGCTAGTACTATGGAAGCTCAGGAAGGAGTGGCCATTGAGATAGCATAAGCTGTTGTTGGAGCTTTGAA
TGGAGAGCTTGCAGCTACTGCTGTCAATGCTCCAATGGTGCCTGCTGAGGTTCTCTCTGAGCTGAAGCCTTTTGTTGCACTGGCTGAAAAACTTG
GTAGACTTGCTGTCCAACTAGTGGCAGGTGGAAGTGGTGTGAAATCAGTGAAAGTAACTTATGGTTCAGCTAGAGGACCTGATGATCTTGACACG
AGATTGCTTCGGGCGATGATAACCAAGGGATTGATTGAGCCTATTTCCAGTTCTTTTGTGAACTTGGTAAATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268445] | SGN-U573303 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82506 [Download][View] | Facility Assigned ID: TGSBZ38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
