EST details — SGN-C46755
| Search information |
| Request: 46755 | Match: SGN-C46755 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C46755 | Clone name: cLEI-13-J2 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177636 is on microarray TOM1: SGN-S1-1-7.2.6.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177636 [TUS-27-B2] | Trace: SGN-T192996 | EST: SGN-E391670 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177636 [TUS-27-B2] | Trace: SGN-T199895 | EST: SGN-E398569 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268450 | Length: 655 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268450 [] (trimmed)
TTGGGAGTAGTATTAAGCTACAACCTGGTTTTACTGCTGGAATTATTACTTCTTTTTATCTTTCAAATAATCAAGATTATCCGGGGAACCATGAT
GAAATTGATATTGAATTTCTTGGAACAACACCAAACAAGCCATATACTTTACAAACAAATGTGTATATAAGAGGAAGTGGAGATGGAAATATTAT
TGGAAGAGAAATGAAATTTCATCTTTGGTTTGATCCAACAAAAGATTATCACAATTATGCAATCCTTTGGGACCCCAATGAGATCATATTTTTTG
TCGATGATGTCCCTATTAGAAGATACCCTAAAAAAAATGATGCAACATTTCCACAAAGACCTATGTATGTCTATGGTTCAATTGGGGATGCATCA
TCTTGGGCAACGGAGGAAGGACGAATTAAAGCGGATTATCGATACCAACCTTTTATCGGAAAATATAGTAATAATTTCAAGGTTGAAGGTTGCGC
GGCCTACGAGAGTCCCTCTTGTCGTCGAGCGCCTTCTAGCTCTCCTTCGGGGGGTGGAGGGTTGAGTCGACAACAGATAGAGGCTATGTTGTGGG
TGCATAGGAACTATAAGGTGTACGATTATTGTAGGGATCCTAGGAGGGACCATACTCACACACCTGAGTGTTAGTGTGTGAACGA
GAAATTGATATTGAATTTCTTGGAACAACACCAAACAAGCCATATACTTTACAAACAAATGTGTATATAAGAGGAAGTGGAGATGGAAATATTAT
TGGAAGAGAAATGAAATTTCATCTTTGGTTTGATCCAACAAAAGATTATCACAATTATGCAATCCTTTGGGACCCCAATGAGATCATATTTTTTG
TCGATGATGTCCCTATTAGAAGATACCCTAAAAAAAATGATGCAACATTTCCACAAAGACCTATGTATGTCTATGGTTCAATTGGGGATGCATCA
TCTTGGGCAACGGAGGAAGGACGAATTAAAGCGGATTATCGATACCAACCTTTTATCGGAAAATATAGTAATAATTTCAAGGTTGAAGGTTGCGC
GGCCTACGAGAGTCCCTCTTGTCGTCGAGCGCCTTCTAGCTCTCCTTCGGGGGGTGGAGGGTTGAGTCGACAACAGATAGAGGCTATGTTGTGGG
TGCATAGGAACTATAAGGTGTACGATTATTGTAGGGATCCTAGGAGGGACCATACTCACACACCTGAGTGTTAGTGTGTGAACGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268450] | SGN-U562982 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82511 [Download][View] | Facility Assigned ID: TGSBZ49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |
Working
