Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E467983

Search information 
Request: 467983Match: SGN-E467983
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C218607Clone name: cSTB-2-C12
nocartOrdering Not Available
Library Name: cSTBOrganism: Solanum tuberosum

Tissue: leaves and petioles
Development Stage: 8 weeks old plants

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C218607 [cSTB-2-C12] Trace: SGN-T213205 EST: SGN-E467984 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E467983Length: 605 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E467983 [] (trimmed) GAAAGCGAGCGAGAGAGAGAGAGAGAAGAGTCGCTCGCGTTTACCGCGTCGTCTTCTCATAAACACGCAATCGAAGAACAGTCTTCGATCCCAAG
TTTTTCAAAGGTTAACATCTGAGTCTGTTTAGCTGAAGATAGTGTAGAGGCAAGGATTTAAAGAACTTGAATTAGGAAGTGTCGTAAAGGAGTGA
GTTGCAGAAGATTTAATCCAAAATGAGTGACAATAACTTATTGGATAAAGTCAGTGCTTTTGGGGAGAGATTGAAGATTGGAGGCACGGAGGTTG
GGCAGAAGATCACTGCTGGAATGAGCTCGATGAGTTTCAAGATGAAGGAGCTTTTCCAAGGCCCGAATCAGGCTGATAAACTTGTTGAGGAAGCC
ACAGCTGAAACTCTGGATGAACCTGATTGGGCTATGAATCTTGAGCTTTGTGACATGATTAATCACGAAAGAATTAATAGCGTTGAACTTATACG
GGGCGTGAAGAAAAGATTAATGTTGAAGAGCCCCAGGATTCAGTACTTAGGGTTGGTGTTACTTGAAACTATTGCAAAGAATTGCGAGAAGGCAT
TCTCAGAGATTGCAGCTGAGAGGGTTCTGGATGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E467983] SGN-U270845 Solanum tuberosum Build 4 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T213204 [Download][View] Facility Assigned ID: PSHAF18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0078 Quality Trim Threshold: 14.5