EST details — SGN-C49786

Search information 
Request: 49786Match: SGN-C49786
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C49786Clone name: cLEI-9-J20
cartOrder Clone
Library Name: cLEIOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: whole seedlings
Development Stage: germinating seed

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189020 [TUS-56-L10] Trace: SGN-T338757 EST: SGN-E537882 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E265468Length: 540 bp (820 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E265468 [] (trimmed) ATTCCCTAGCTAGCTGGCTAGCTCTTTCAATTCGTCTCCTTTAGAAACGGTTTCAATTATATATTTGTGTATACTTCATTAAGTATCTGTGAAGA
ATGGAGAGTGAAGGAGGGAACTGTAGCAAAAGCATAAACCAAAATGAATTGGTATTGAAGGAAGATCCGAAATCAAACTTTTTTCAAAAGTATTA
TCGATCTGGTATTATAAAGAAGGTGATAGCAGAGATAATAGCGACGTACCTATTAGTGTTTGTGACATGTGGTGCAGCAAGTCTTAGTTGGAGCG
ATGAACACAAAGTATCAAAGCTTGGAGCGTGCGTAGCTGGTGGACTCATTGTAACTGACATGATATATGCTGTTGGACATACATCTGGTGCTCAT
ATGAACCCTGCTGCTACCTTTGCTTTTGCCGCCGATAGACATTACCCATGGACACAGGTGCCAGTGTATGCAGCAGCACAAGTTACAGGAGCAAT
ATCTGCTGCATTCACGTTACGTGTATTACTTCATCCAGCAACTAAGAATGTGGGAACTACAACTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E265468] SGN-U569106 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T81749 [Download][View] Facility Assigned ID: TGSBJ58TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0189 Quality Trim Threshold: 14.5