EST details — SGN-E537436
| Search information |
| Request: 537436 | Match: SGN-E537436 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188760 | Clone name: TUS-56-A14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C47978 [cLEI-2-P9] | Trace: SGN-T79828 | EST: SGN-E265214 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188760 [TUS-56-A14] | Trace: SGN-T348765 | EST: SGN-E547890 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537436 | Length: 644 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E537436 [] (trimmed)
GAAGTTGGGGTTGTGATCCACTTCTCATCCAAGCCAATAAAGTTGTTCCACTCGAGTCTGTCACTCCTTCTGGATCTGTTAATATACCGGGAACA
CCTTCTACTACTGATTCAAGCTCAAGTGTACAACCTATGCCTGATGTTCAGAGCTTACCCCCTAATTTGCAGCATTATTACACTATTACTAGGAT
ACAGCACAAAGTTGATATGTTAAGAAGGTGTGTGCACGCTCTGGATGCCAAATGTGTAATAGCTTTTATGAACCACACAAAACAGCTAAAAGATG
CTGTCTTCAAACTAGAAGCTCGTGGTATGAATGCTGCAGAATTACATGGTGATCTTAGCAAACTTGTGAGATCAACAATCTTAAAGAAGTTCAGA
AATGGGGAGATTAGAGTGCTGCTAACGAATGAGCTTTCAGCTAGAGGCTTGGATTTACCTGAATGTGATCTTGTAGTTAATCTGGGGTTACCTAC
TGACTCGGTTCATTATGCTCATCGAGCTGGTCGTACGGGCAGGCTTGGTCGCAAGGGCACGGTAGTAACCATATGTGAAGAGTCAGAAGTCTTTG
TGTTAAAAAAGCTACAGAAGCAACTTTCCCTCTCTATCGAGGCATGTGAATTTCCTGAGGCGAATCTTGTCATT
CCTTCTACTACTGATTCAAGCTCAAGTGTACAACCTATGCCTGATGTTCAGAGCTTACCCCCTAATTTGCAGCATTATTACACTATTACTAGGAT
ACAGCACAAAGTTGATATGTTAAGAAGGTGTGTGCACGCTCTGGATGCCAAATGTGTAATAGCTTTTATGAACCACACAAAACAGCTAAAAGATG
CTGTCTTCAAACTAGAAGCTCGTGGTATGAATGCTGCAGAATTACATGGTGATCTTAGCAAACTTGTGAGATCAACAATCTTAAAGAAGTTCAGA
AATGGGGAGATTAGAGTGCTGCTAACGAATGAGCTTTCAGCTAGAGGCTTGGATTTACCTGAATGTGATCTTGTAGTTAATCTGGGGTTACCTAC
TGACTCGGTTCATTATGCTCATCGAGCTGGTCGTACGGGCAGGCTTGGTCGCAAGGGCACGGTAGTAACCATATGTGAAGAGTCAGAAGTCTTTG
TGTTAAAAAAGCTACAGAAGCAACTTTCCCTCTCTATCGAGGCATGTGAATTTCCTGAGGCGAATCTTGTCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537436] | SGN-U581478 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338311 [Download][View] | Facility Assigned ID: TUS56A14_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0114 | Quality Trim Threshold: 14.5 |
Working
