EST details — SGN-E537926
| Search information |
| Request: 537926 | Match: SGN-E537926 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189047 | Clone name: TUS-56-M13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46073 [cLEI-11-C20] | Trace: SGN-T81981 | EST: SGN-E265826 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189047 [TUS-56-M13] | Trace: SGN-T338803 | EST: SGN-E537928 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537926 | Length: 698 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E537926 [] (trimmed)
CTGCTAATGAAAGAAATCTCTTGATACAGGGAAAATGTTTACAAGGATACCACGTAAATGCTTTTAACTCAAATTGAAGGAATGTGTGGTTCAAA
AGTCAAAACTCAGCTAACCCCTATTTTTCTGCAAATCACATCTATATTACAAAAGAAACATCCCAAGGGAAAAAAGAATGTGCCGTGAAACTTAT
ATAAGGCATAAATGCTAAACCTTAAATCGAGAGTAGCATTTGTCACAGAGATGCTGCTGTACAAAACCTCTATCCAAATCAATATGAAAACTCAT
GACCTCGGAGTGAAATGTGCTTCTTTACCCAGATGGCAATATCCTCAGCACAAGCCTGAGCCTGAGGGGTCTTGAGAAGCATGTCAAGAGTTGCA
AACTCGTGAACAGCATCCTTATATTCAAGAACAGGAGCATCAACATTTACTTTCCGGAGTTCCTCTGAATAAGCAATAGCCCGATCTTTCATCCA
GTCATGCTCTGCTATAATTGTCAATGTTGGGGGCATTCGTTTTAACGGAGGTCCTCCTCTACCAGCAACAAGTGGGTTGGCAGCAGGGTGATCCA
AGTTAAACTCTCCTTCAGGTAAAAGTAATTTCCAGGCAAGTACGCACATTGCCTTGTCATAGAAATAGGAATTAGCTAGCTTTATCTCAGAATGA
GTTGGAACATTGCCAATGAAAAATGGATACATC
AGTCAAAACTCAGCTAACCCCTATTTTTCTGCAAATCACATCTATATTACAAAAGAAACATCCCAAGGGAAAAAAGAATGTGCCGTGAAACTTAT
ATAAGGCATAAATGCTAAACCTTAAATCGAGAGTAGCATTTGTCACAGAGATGCTGCTGTACAAAACCTCTATCCAAATCAATATGAAAACTCAT
GACCTCGGAGTGAAATGTGCTTCTTTACCCAGATGGCAATATCCTCAGCACAAGCCTGAGCCTGAGGGGTCTTGAGAAGCATGTCAAGAGTTGCA
AACTCGTGAACAGCATCCTTATATTCAAGAACAGGAGCATCAACATTTACTTTCCGGAGTTCCTCTGAATAAGCAATAGCCCGATCTTTCATCCA
GTCATGCTCTGCTATAATTGTCAATGTTGGGGGCATTCGTTTTAACGGAGGTCCTCCTCTACCAGCAACAAGTGGGTTGGCAGCAGGGTGATCCA
AGTTAAACTCTCCTTCAGGTAAAAGTAATTTCCAGGCAAGTACGCACATTGCCTTGTCATAGAAATAGGAATTAGCTAGCTTTATCTCAGAATGA
GTTGGAACATTGCCAATGAAAAATGGATACATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537926] | SGN-U583594 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338801 [Download][View] | Facility Assigned ID: TUS56M13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
