EST details — SGN-E538265
| Search information |
| Request: 538265 | Match: SGN-E538265 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189261 | Clone name: TUS-57-F11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C61958 [cLEM-1-A12] | Trace: SGN-T83802 | EST: SGN-E270429 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189261 [TUS-57-F11] | Trace: SGN-T339137 | EST: SGN-E538262 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E538265 | Length: 577 bp (865 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E538265 [] (trimmed)
CCCTGGTGAAGTGTTTGGGAGTCCGGGATTTGCCTCCACAAGCTTCTTCCTTGTCTCCCTGTGATTCTCTCCGATCTTTGTCCATCCGAAGCTGT
CCAGGATTCGGTAGCACAAGCTTAGCTATGGTGGGGAAGCTATGTCCCCAGCTTCATCATTTGGATCTCAGTGGGCTTACTCGAATAACAGATGC
TGGGCTTCTCCCACTTTTGGAGAGCTCCAAGGCAGGACTCGTCAAGGTTAATCTTACTCACTGCATGAACGTGACCGATGAAGTGGTGCTCTCAT
TAGCTAGGCTACACGGTGAAACTTTGGAATTGCTGAATCTTGATGGATGCAGGAAGGTTACCGATGCAAGCTTGGTGGCAATTGCTGATAATTGT
CTATTACTTAACGATCTTGATGTTTCGAAGTGTTCAATAACTGATTCGGGTGTAGCTGCTTTATCTCAAGGAGTGCAAATGAATTTGCAGGTTCT
TTCACTATCAGGTTGCTCCATGGTAACAAACAAGAGCTTTTCGTCTCTTAGAACATTGGGTGAGAGCTTGATTGGTTTGATCTCCAGCACTGCAG
CTCCATC
CCAGGATTCGGTAGCACAAGCTTAGCTATGGTGGGGAAGCTATGTCCCCAGCTTCATCATTTGGATCTCAGTGGGCTTACTCGAATAACAGATGC
TGGGCTTCTCCCACTTTTGGAGAGCTCCAAGGCAGGACTCGTCAAGGTTAATCTTACTCACTGCATGAACGTGACCGATGAAGTGGTGCTCTCAT
TAGCTAGGCTACACGGTGAAACTTTGGAATTGCTGAATCTTGATGGATGCAGGAAGGTTACCGATGCAAGCTTGGTGGCAATTGCTGATAATTGT
CTATTACTTAACGATCTTGATGTTTCGAAGTGTTCAATAACTGATTCGGGTGTAGCTGCTTTATCTCAAGGAGTGCAAATGAATTTGCAGGTTCT
TTCACTATCAGGTTGCTCCATGGTAACAAACAAGAGCTTTTCGTCTCTTAGAACATTGGGTGAGAGCTTGATTGGTTTGATCTCCAGCACTGCAG
CTCCATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E538265] | SGN-U578110 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T339140 [Download][View] | Facility Assigned ID: TUS57F11_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
