EST details — SGN-E538302
| Search information |
| Request: 538302 | Match: SGN-E538302 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189286 | Clone name: TUS-57-G12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C62240 [cLEM-1-O4] | Trace: SGN-T83585 | EST: SGN-E270212 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189286 [TUS-57-G12] | Trace: SGN-T339178 | EST: SGN-E538303 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E538302 | Length: 790 bp (922 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E538302 [] (trimmed)
GAGCTAAATTCCGATTATTTATTATTTCTCCAGATGAGTCAACATCCAACTAAAAACAAAACTATCAACTTCACTTTACATTTGACTTCACTGGG
GTACCTTCAATTCCAAGCTACAACTAGCAAACCATGAGGTAAATTAAAGCTGATTTGAACACCAGGAGGGTACTAATAAGTAGCACAAATTACTA
CATCTATTTGGTCTATATATACAGCACTGGGACTTTCCATCACCAAAACGCCTTACATATCTATCTCATAGAAAAGGCTAATGCCAAAATATACC
CAGACAACATCCTCCAAAAGAAGACTACTCGTAGAAAGTTCAAAGTCTATCTCCTCCATCATGCAAGAGCTTCCGCCTCGTGCAGGAGCATTTGA
TCAAAGTGCCAGACACCATGACCTTTGTCCACTCTTCTCAGCTGAGCTACATATTCCGAGATCTTCTTGATTGCTTCCACCTGTTCTTGCAAGTA
CTCGTTTTCTACAAAATCAGCCAACTGCACATCATTGTTTCGTGTGGCTACAGCATGCAAGTTTAAGAGCTTCTCATTTGTCAACTTCTCCAAAG
AAAGTGCAAGCTCCATTGCATACAATGCATCCCCCTTCTCAGCATGATCAAATTCGGAATATGGCATTAAAATAGACTGCAGCTTCACTTTCCCA
CCACGCTTGTTCTGATACTCCATGAACTTCTCAGCATGTTCCCTTTCCCCTCTCAACTGATCCCTTGAAAACTTGGCAAGTCCCTTGAGAGCAAC
ATTGTCTCTGTCGAAATGGCATACATAGCA
GTACCTTCAATTCCAAGCTACAACTAGCAAACCATGAGGTAAATTAAAGCTGATTTGAACACCAGGAGGGTACTAATAAGTAGCACAAATTACTA
CATCTATTTGGTCTATATATACAGCACTGGGACTTTCCATCACCAAAACGCCTTACATATCTATCTCATAGAAAAGGCTAATGCCAAAATATACC
CAGACAACATCCTCCAAAAGAAGACTACTCGTAGAAAGTTCAAAGTCTATCTCCTCCATCATGCAAGAGCTTCCGCCTCGTGCAGGAGCATTTGA
TCAAAGTGCCAGACACCATGACCTTTGTCCACTCTTCTCAGCTGAGCTACATATTCCGAGATCTTCTTGATTGCTTCCACCTGTTCTTGCAAGTA
CTCGTTTTCTACAAAATCAGCCAACTGCACATCATTGTTTCGTGTGGCTACAGCATGCAAGTTTAAGAGCTTCTCATTTGTCAACTTCTCCAAAG
AAAGTGCAAGCTCCATTGCATACAATGCATCCCCCTTCTCAGCATGATCAAATTCGGAATATGGCATTAAAATAGACTGCAGCTTCACTTTCCCA
CCACGCTTGTTCTGATACTCCATGAACTTCTCAGCATGTTCCCTTTCCCCTCTCAACTGATCCCTTGAAAACTTGGCAAGTCCCTTGAGAGCAAC
ATTGTCTCTGTCGAAATGGCATACATAGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E538302] | SGN-U574969 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T339177 [Download][View] | Facility Assigned ID: TUS57G12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 12.5 |
Working
