EST details — SGN-E538303
| Search information |
| Request: 538303 | Match: SGN-E538303 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189286 | Clone name: TUS-57-G12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C62240 [cLEM-1-O4] | Trace: SGN-T83585 | EST: SGN-E270212 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189286 [TUS-57-G12] | Trace: SGN-T339177 | EST: SGN-E538302 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E538303 | Length: 771 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E538303 [] (trimmed)
GGTTTACCATGCTATGTATGCCTATTTCGACAGAGACAATGTTGCTCTCAAGGGACTTGCCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGGG
AACATGCTGAGAAGTTCATGGAGTATCAGAACAAGCGTGGTGGGAAAGTGAAGCTGCAGTCTATTTTAATGCCATTATCCGAATTTGATCATGCT
GAGAAGGGGGATGCATTGTATGCAATGGAGCTTGCACTTTCTTTGGAGAAGTTGACAAATGAGAAGCTCTTAAACTTGCATGCTGTAGCCACACG
AAACAATGATGTGCAGTTGGCTGATTTTGTAGAAAACGAGTACTTGCAAGAACAGGTGGAAGCAATCAAGAAGATCTCGGAATATGTAGCTCAGC
TGAGAAGAGTGGACAAAGGTCATGGTGTCTGGCACTTTGATCAAATGCTCCTGCACGAGGCGGAAGCTCTTGCATGATGGAGGAGATAGACTTTG
AACTTTCTACGAGTAGTCTTCTTTTGGAGGATGTTGTCTGGGTATATTTTGGCATTAGCCTTTTCTATGAGATAGATATGTAAGGCGTTTTGGTG
ATGGAAAGTCCCAGTGCTGTATATATAGACCAAATAGATGTAGTAATTTGTGCTACTTATTAGTACCCTCCTGGTGTTCAAATCAGCTTTAATTT
ACCTCATGGTTTGCTAGTTGTAGCTTGGAATTGAAGGTACCCCAGTGAAGTCAAATGTAAAGTGAAGTTGATAGTTTTGTTTTTAGTTGGATGTT
GACTCATCTGG
AACATGCTGAGAAGTTCATGGAGTATCAGAACAAGCGTGGTGGGAAAGTGAAGCTGCAGTCTATTTTAATGCCATTATCCGAATTTGATCATGCT
GAGAAGGGGGATGCATTGTATGCAATGGAGCTTGCACTTTCTTTGGAGAAGTTGACAAATGAGAAGCTCTTAAACTTGCATGCTGTAGCCACACG
AAACAATGATGTGCAGTTGGCTGATTTTGTAGAAAACGAGTACTTGCAAGAACAGGTGGAAGCAATCAAGAAGATCTCGGAATATGTAGCTCAGC
TGAGAAGAGTGGACAAAGGTCATGGTGTCTGGCACTTTGATCAAATGCTCCTGCACGAGGCGGAAGCTCTTGCATGATGGAGGAGATAGACTTTG
AACTTTCTACGAGTAGTCTTCTTTTGGAGGATGTTGTCTGGGTATATTTTGGCATTAGCCTTTTCTATGAGATAGATATGTAAGGCGTTTTGGTG
ATGGAAAGTCCCAGTGCTGTATATATAGACCAAATAGATGTAGTAATTTGTGCTACTTATTAGTACCCTCCTGGTGTTCAAATCAGCTTTAATTT
ACCTCATGGTTTGCTAGTTGTAGCTTGGAATTGAAGGTACCCCAGTGAAGTCAAATGTAAAGTGAAGTTGATAGTTTTGTTTTTAGTTGGATGTT
GACTCATCTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E538303] | SGN-U574969 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T339178 [Download][View] | Facility Assigned ID: TUS57G12_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0004 | Quality Trim Threshold: 14.5 |
Working
