EST details — SGN-E540073
| Search information |
| Request: 540073 | Match: SGN-E540073 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190345 | Clone name: TUS-60-C15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C79722 [cLES-9-O12] | Trace: SGN-T99495 | EST: SGN-E287676 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190345 [TUS-60-C15] | Trace: SGN-T340950 | EST: SGN-E540075 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E540073 | Length: 723 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E540073 [] (trimmed)
GAAACAAATTAGCCATCATATATGAAAAATATAAGCATTTCAAAATTACATAACAAAATTCTTTAAATGTTAAGGAGCAATATATTACATCCATC
TGAAAAGAAATGACCATATCATATTCTAGAATTAATACTCTATGAGAACTCGCATAATTTACATTGGTCATATACCATCTTCGTAGCTAGACACC
TCAAGAATAAAACTAGTTGGTAATTTCCATAAGCCAAAAGATGCGAAACCTAATATTTCTCTTGCACGATGAGCAACTTCAGCGATAAGTCTATT
AAGTTGAGACCGAGATCCCAAATCTTGAAACTTCTGTTAGCAATCCTCTCACATATCATACTTCATCTGATACACCCAAAGGTCTTGTTCTCTTT
AACATGTGTTCTAATCAGTTGTTTGTTAATCTACTGTTGAGTTATTATAGGAGTCTTCTATGCTTTAGCATAGAAGGGAGGAGATTTCCTTTCCC
GACAGTGAAGTAGGGAAGACGACGAGCTAGAAGGAGCAGCAACTTCACTACCCCAACGACACTCCGACGAGCTTTGCAAGAGGCGAGCACAAAAG
AAATTCTCTTATAGATTCTTGCTTGAGGAACTTCACTACTAATTTTTTTTTTGATGTATGTATTCTTGTATTTATATTTCTTTCAGATTTTTTGT
CTCCCCAACTCTATCTAAGTATTCTCCTCTGTTTTTCTCACCTCCAACACTAAAGGAA
TGAAAAGAAATGACCATATCATATTCTAGAATTAATACTCTATGAGAACTCGCATAATTTACATTGGTCATATACCATCTTCGTAGCTAGACACC
TCAAGAATAAAACTAGTTGGTAATTTCCATAAGCCAAAAGATGCGAAACCTAATATTTCTCTTGCACGATGAGCAACTTCAGCGATAAGTCTATT
AAGTTGAGACCGAGATCCCAAATCTTGAAACTTCTGTTAGCAATCCTCTCACATATCATACTTCATCTGATACACCCAAAGGTCTTGTTCTCTTT
AACATGTGTTCTAATCAGTTGTTTGTTAATCTACTGTTGAGTTATTATAGGAGTCTTCTATGCTTTAGCATAGAAGGGAGGAGATTTCCTTTCCC
GACAGTGAAGTAGGGAAGACGACGAGCTAGAAGGAGCAGCAACTTCACTACCCCAACGACACTCCGACGAGCTTTGCAAGAGGCGAGCACAAAAG
AAATTCTCTTATAGATTCTTGCTTGAGGAACTTCACTACTAATTTTTTTTTTGATGTATGTATTCTTGTATTTATATTTCTTTCAGATTTTTTGT
CTCCCCAACTCTATCTAAGTATTCTCCTCTGTTTTTCTCACCTCCAACACTAAAGGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540073] | SGN-U583857 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340948 [Download][View] | Facility Assigned ID: TUS60C15_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 12.5 |
Working
