EST details — SGN-E540524

Search information 
Request: 540524Match: SGN-E540524
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190606Clone name: TUS-60-N12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76857 [cLES-19-J9] Trace: SGN-T101961 EST: SGN-E287904 Direction: 5' Facility: TIGR
Clone: SGN-C190606 [TUS-60-N12] Trace: SGN-T341396 EST: SGN-E540521 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E540524Length: 434 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E540524 [] (trimmed) TTAGGGTTTCTTTTTCTTTGTGAGCGAAAAAAATGGCTGATGAGGGTTGTGAGAGGCTCAAGGGAACTGTCAAGTGGTTTAGTGACCAGAAGGGG
TTTGGGTTCATCACCCCCGCCGATGGCTCTGAAGATCTGTTTGTACACCAGTCTGGTATCAGATCTGAAGGATTCAGAAGCCTAGCTGAAGGTGA
GGATGTTGAGTATCAGATTGAGTCTGGCTCAGATGGTAGGGCTAAGGCTTCCGATGTTACTGGACCTAATGAAGCGGCTGTTAAAGGAGGTTCCC
GCAGCGGTGGAGGACGTGATGGAGGTGGTTACGGCGGAGGCGGTGGTTACGGTGGAGGCGGAGGTTACTGTGGTGGCCGAGGAGGAAATCGTGGT
TATGGAGGTGGTGACAGTGGCTACCGAGGAGGTAGCCTACGTGGTGGCTGCTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540524] SGN-U579937 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341399 [Download][View] Facility Assigned ID: TUS60N12_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5