EST details — SGN-E540742
| Search information |
| Request: 540742 | Match: SGN-E540742 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190733 | Clone name: TUS-61-C19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C88184 [cLET-7-F10] | Trace: SGN-T104290 | EST: SGN-E292037 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190733 [TUS-61-C19] | Trace: SGN-T341614 | EST: SGN-E540739 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E540742 | Length: 753 bp (887 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E540742 [] (trimmed)
GTTGGACCCATCTGATCTCAGTTTTCCAGCTCGAAAACCACACGGTAACTAACGTAAGTTGAACGAACCCTGCCCTAAACTCTTCTAGTCAACAA
TGGCTTCTCTGTCCAGATTTATTGGGAAACAATGTAAATTGCAGTGTTCAGACACACTTCAGAGACCAAGTTATGGGTTTTGTGTTAGAAGGAGT
CCGACCCATTTGAGTATGGGTATGAGAAATGGAGATGAGATTGGAAGATATAATTTGTTCATCAATCAAAATCAAAGTAAGACTTCCCTAGTTCA
ATCCCCGTGCAATCGCAAAATAGTATGTTGCGAGGCAGCATCAAATGTGTCTGGGGAAAGCTCTTCCACTGGAATGACCCAATATGAGAAAATAA
TTGAGACTTTGACCACCCTTTTTCCTCTATGGGTTATATTGGGTACAATCATTGGCATATATAAACCTTCTGCGGTCACTTGGTTGGAAACAGAT
CTCTTCACTCTGGGTTTGGGATTTCTAATGCTTTCAATGGGTTTGACACTAACATTTGACGACTTCCGAAGATGTTTAAGGAACCCATGGACTGT
AGGTGTTGGATTTCTCGCTCAGTACTTCATTAAACCACTCTTAGGCTTCACCATAGCAATGGCTCTAAAGTTGTCCGCCCCACTTGCTACTGGTC
TGATCTTGGTGTCATGCTGTCCTGGAGGCCAGCTTCTAATGTGGCAACATATATTTCAAAGGGGAATGTAGCCCTCTCTGTTCTAAAT
TGGCTTCTCTGTCCAGATTTATTGGGAAACAATGTAAATTGCAGTGTTCAGACACACTTCAGAGACCAAGTTATGGGTTTTGTGTTAGAAGGAGT
CCGACCCATTTGAGTATGGGTATGAGAAATGGAGATGAGATTGGAAGATATAATTTGTTCATCAATCAAAATCAAAGTAAGACTTCCCTAGTTCA
ATCCCCGTGCAATCGCAAAATAGTATGTTGCGAGGCAGCATCAAATGTGTCTGGGGAAAGCTCTTCCACTGGAATGACCCAATATGAGAAAATAA
TTGAGACTTTGACCACCCTTTTTCCTCTATGGGTTATATTGGGTACAATCATTGGCATATATAAACCTTCTGCGGTCACTTGGTTGGAAACAGAT
CTCTTCACTCTGGGTTTGGGATTTCTAATGCTTTCAATGGGTTTGACACTAACATTTGACGACTTCCGAAGATGTTTAAGGAACCCATGGACTGT
AGGTGTTGGATTTCTCGCTCAGTACTTCATTAAACCACTCTTAGGCTTCACCATAGCAATGGCTCTAAAGTTGTCCGCCCCACTTGCTACTGGTC
TGATCTTGGTGTCATGCTGTCCTGGAGGCCAGCTTCTAATGTGGCAACATATATTTCAAAGGGGAATGTAGCCCTCTCTGTTCTAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540742] | SGN-U568384 | Tomato 200607 | Build 2 | 49 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341617 [Download][View] | Facility Assigned ID: TUS61C19_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |
Working
