EST details — SGN-E540899
| Search information |
| Request: 540899 | Match: SGN-E540899 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190826 | Clone name: TUS-61-G16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
See unigene SGN-U564497 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C79984 [cLET-10-O11] | Trace: SGN-T104971 | EST: SGN-E290802 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190826 [TUS-61-G16] | Trace: SGN-T341776 | EST: SGN-E540901 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E540899 | Length: 735 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E540899 [] (trimmed)
GCAGTTATCAACAGTGTTGTTATACTTGACAATAACAATTAAATAGTAGTAAATATAATTAACCTGTAGTATTTACTAACACATATATTACATCT
GCAGCAAAATTGTGTCCAAAATCAACCTAGTTTTACTTCTCTTTATCAACTTTCTTTCCAATCCAAGTAGCAACAATTGGTGTTAAAGCAACAGT
AGGGGGAAATCTAATAGGTGATGCGGCTTTGTGAGCGGCATAAGCCAATGCAAAAGTTCCCACTTTCTCACCAGTCTCATCAGTAGAAATACCAA
CCTTTTGTAGCAAGGATTGAACATCAACACCAGAATTGATGAGAGCATAACAGAGACCAAATGATATCAATGAGAGAGTAATTGAAGTTGCTAAA
TAAGCTCCTCCATATTTTGCCAAAAGCTCTTTTGCTTGATCCCCTTTTGATTTCTTATCCTTGTTCTCTTCATCTCTATCCTCTTTTGAGCTAAA
TATCTTCCATAGGCCAGCTTCTAAACCAAATTTCTTTGTAATTTCCTCAGCAGATTTAACTTCTTCTGTTGTTTTCTCCTTCAATGCTCTAATTT
TAAACTTTTTATTGGAATTTGAGGTAACTGAATTTAGTGCCTTGTTTGGTTTTCTTAAATTTGGAAAAACAGGAAATAAAGAACAAAGAGCAATT
TTACTGTACTGAGAAGAAATTTGTAAAGCAGAAGCCATATTTTTTTTGAGTTTATCCAAACGCGGCGTTT
GCAGCAAAATTGTGTCCAAAATCAACCTAGTTTTACTTCTCTTTATCAACTTTCTTTCCAATCCAAGTAGCAACAATTGGTGTTAAAGCAACAGT
AGGGGGAAATCTAATAGGTGATGCGGCTTTGTGAGCGGCATAAGCCAATGCAAAAGTTCCCACTTTCTCACCAGTCTCATCAGTAGAAATACCAA
CCTTTTGTAGCAAGGATTGAACATCAACACCAGAATTGATGAGAGCATAACAGAGACCAAATGATATCAATGAGAGAGTAATTGAAGTTGCTAAA
TAAGCTCCTCCATATTTTGCCAAAAGCTCTTTTGCTTGATCCCCTTTTGATTTCTTATCCTTGTTCTCTTCATCTCTATCCTCTTTTGAGCTAAA
TATCTTCCATAGGCCAGCTTCTAAACCAAATTTCTTTGTAATTTCCTCAGCAGATTTAACTTCTTCTGTTGTTTTCTCCTTCAATGCTCTAATTT
TAAACTTTTTATTGGAATTTGAGGTAACTGAATTTAGTGCCTTGTTTGGTTTTCTTAAATTTGGAAAAACAGGAAATAAAGAACAAAGAGCAATT
TTACTGTACTGAGAAGAAATTTGTAAAGCAGAAGCCATATTTTTTTTGAGTTTATCCAAACGCGGCGTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540899] | SGN-U564497 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341774 [Download][View] | Facility Assigned ID: TUS61G16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.935 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 12.5 |
Working
