EST details — SGN-E541043
| Search information |
| Request: 541043 | Match: SGN-E541043 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190910 | Clone name: TUS-61-K4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81515 [cLET-16-P14] | Trace: SGN-T106741 | EST: SGN-E292608 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E541043 | Length: 712 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541043 [] (trimmed)
GAAATAATGAGCAATTTTTTAATTTTCTTTAATCTCCTTTTACAAGAAAAGCAAGTAATAACAACAATAATGCTCTAACATGGAATAAGGAGTTT
CACTCCTCCTTCCTACAAGAAAAGAATAATATTCTTTTTTTCTTTTTTGTTCTTTCTCTTCTTTTCGCTTTTTTTGCGATAACATAAAATCTAAA
AATTCTAAAAATAAAAAAAATTAATCTTTTATAAACTTTTCTTGATTATAACCATAATAGGAGAGATACCCCCTAACGAATTTTCCCAACCCGGT
TTGCAAGTTGGTTGTTGGTTTATACCCGAGTTCCTTTTGGGCCAAACTAATATTCGCATGGGTAAACGGAACGTCGCCGTTTCCAGGCATATCCA
ATACATGTTTTTTAGCTTTTACTTTCAAATGCTTCTCTAACATCGCAACCATCATCGGTACCGTAACGGGCGAAGTATTACCCAAATTAAATATC
CGAAACATAGCCGGGCCCCGTTTTTTCCCACCCGACCCGGTACTCTTCCCTGCTGTATCAAGTGACCCAACACACCCTTTCACGATATCATCGAT
GTACGTAAAATCACGTGCTAAATCAACTCGATTCTTACCTCGATAAACTGTTATTGGTTTACCTCGTAAGATATTCCGGGTAAATGAAAAATAAG
CCATGTCGGGTCTTCCCCATGGTCCGTAAACAGTAAAAACCTCAACC
CACTCCTCCTTCCTACAAGAAAAGAATAATATTCTTTTTTTCTTTTTTGTTCTTTCTCTTCTTTTCGCTTTTTTTGCGATAACATAAAATCTAAA
AATTCTAAAAATAAAAAAAATTAATCTTTTATAAACTTTTCTTGATTATAACCATAATAGGAGAGATACCCCCTAACGAATTTTCCCAACCCGGT
TTGCAAGTTGGTTGTTGGTTTATACCCGAGTTCCTTTTGGGCCAAACTAATATTCGCATGGGTAAACGGAACGTCGCCGTTTCCAGGCATATCCA
ATACATGTTTTTTAGCTTTTACTTTCAAATGCTTCTCTAACATCGCAACCATCATCGGTACCGTAACGGGCGAAGTATTACCCAAATTAAATATC
CGAAACATAGCCGGGCCCCGTTTTTTCCCACCCGACCCGGTACTCTTCCCTGCTGTATCAAGTGACCCAACACACCCTTTCACGATATCATCGAT
GTACGTAAAATCACGTGCTAAATCAACTCGATTCTTACCTCGATAAACTGTTATTGGTTTACCTCGTAAGATATTCCGGGTAAATGAAAAATAAG
CCATGTCGGGTCTTCCCCATGGTCCGTAAACAGTAAAAACCTCAACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541043] | SGN-U580628 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341918 [Download][View] | Facility Assigned ID: TUS61K04_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
