EST details — SGN-E541074
| Search information |
| Request: 541074 | Match: SGN-E541074 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190928 | Clone name: TUS-61-K22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81755 [cLET-17-P21] | Trace: SGN-T106857 | EST: SGN-E294802 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190928 [TUS-61-K22] | Trace: SGN-T341952 | EST: SGN-E541077 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541074 | Length: 511 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541074 [] (trimmed)
GGAGCATTATCTATTTATCTTGCATGTGAAATTAAAAGAAACGAATCGCGAATATAAGAATTCAGGCTTACAGTAAGATGTCATTGACATACCCT
ATGTTCAAGGGAAAAATGATGTTCTCTGCAGATACGAAATATGCTTCTTACCTCATTCTTTCAAAAGGTAAATGACAACAGATAGGGTTTTCTTT
ATCTAAATTCATTATAAATGGCCTATAATATGAACGGAGAAGGGGGTGAACTTGATCCACTACAGCCTAATTGGTGACTACTGAGAAGTTTACTC
GAATTGAATAAGTTAGAAAACTAAACCTTGGTACTTTATGAAAGTGTGGATAGCCCTCTCCAATTCTTGCGTTCCTGAAGATAACCTCAAAAAGC
ATAACGGTAGATTGCATCAGCTGCTCCATTTTCATCGTTGCTGGCACCAATCACGTCTGCAACAGCTTTTGCCTTCTCTGATCCATTGCTAAGAG
CAACACCGAGGGAAGCCAACTTAAGCATCTCCACAT
ATGTTCAAGGGAAAAATGATGTTCTCTGCAGATACGAAATATGCTTCTTACCTCATTCTTTCAAAAGGTAAATGACAACAGATAGGGTTTTCTTT
ATCTAAATTCATTATAAATGGCCTATAATATGAACGGAGAAGGGGGTGAACTTGATCCACTACAGCCTAATTGGTGACTACTGAGAAGTTTACTC
GAATTGAATAAGTTAGAAAACTAAACCTTGGTACTTTATGAAAGTGTGGATAGCCCTCTCCAATTCTTGCGTTCCTGAAGATAACCTCAAAAAGC
ATAACGGTAGATTGCATCAGCTGCTCCATTTTCATCGTTGCTGGCACCAATCACGTCTGCAACAGCTTTTGCCTTCTCTGATCCATTGCTAAGAG
CAACACCGAGGGAAGCCAACTTAAGCATCTCCACAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541074] | SGN-U569991 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341949 [Download][View] | Facility Assigned ID: TUS61K22_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 12.5 |
Working
