EST details — SGN-E542886
| Search information |
| Request: 542886 | Match: SGN-E542886 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191979 | Clone name: TUS-64-G17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91192 [cLEW-26-E7] | Trace: SGN-T114697 | EST: SGN-E302865 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E542886 | Length: 800 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E542886 [] (trimmed)
GCTTTGCTATTGATATACGAAACATCTCACTTATGGTTTTTTTTAGTTACGAAATATTTATTTTGATATATTCTAGGAGTTTTTTATTTTCTTAA
ATTTCGTGCAAAATTGTTTCATACCAATAAATTACTGAAATGATTGGAGTTGGATGCTTTTTAGCAGACAAATTTGACTAAAATAATTTTGATTT
ACCAAACTTAAAGTTATTGTTAATGGTCCATTATAGCCGATATAGTTGTTCAAATCATTTTTAATAAAAGCAATTTTGAAATAGTTTCTTTGCTT
CCTATTCACAACTTTAGAATCAGGATCTGGTTCATGCATTTCACATCAATCTTTCTTATATTCCATTCCAATTCAGTTGGATCACTACATCCTAG
CTTTTTTTTTTTCGAAAGGGGAAATGAGGTAGGAGAGAATAAGGTGGTAAATCGAGCTTTTGCTAACAAACCGAAAGTTCAGATAAGTCAATCAG
CTGAGCTACTAATGTTTCTCATTTTTGCTTTTGCAGATGGAGAGGTGGTAGAGGAATTGAAGAACTCAACTTTCCCTGCATTGGTACTTTAATGC
CATGACTACAGTTGAAGGCTCTAAAGAAGAAATGGAGGGAAGTAGTATTGAGAGATATAGCAAGATCAAGAAAGGATCCTGGTTAGACCAATTTC
GACATGGCTCTAATCCTTGGATGGCTAGATATCTTTACGCCATATTGTTTCTCATTGCTAATTTATTAGCTTGGGCTGTTCGTGATTATGGCCAT
AGCATTTTGAAAGAAATGAAGAGACTTAAAGGATGTAATG
ATTTCGTGCAAAATTGTTTCATACCAATAAATTACTGAAATGATTGGAGTTGGATGCTTTTTAGCAGACAAATTTGACTAAAATAATTTTGATTT
ACCAAACTTAAAGTTATTGTTAATGGTCCATTATAGCCGATATAGTTGTTCAAATCATTTTTAATAAAAGCAATTTTGAAATAGTTTCTTTGCTT
CCTATTCACAACTTTAGAATCAGGATCTGGTTCATGCATTTCACATCAATCTTTCTTATATTCCATTCCAATTCAGTTGGATCACTACATCCTAG
CTTTTTTTTTTTCGAAAGGGGAAATGAGGTAGGAGAGAATAAGGTGGTAAATCGAGCTTTTGCTAACAAACCGAAAGTTCAGATAAGTCAATCAG
CTGAGCTACTAATGTTTCTCATTTTTGCTTTTGCAGATGGAGAGGTGGTAGAGGAATTGAAGAACTCAACTTTCCCTGCATTGGTACTTTAATGC
CATGACTACAGTTGAAGGCTCTAAAGAAGAAATGGAGGGAAGTAGTATTGAGAGATATAGCAAGATCAAGAAAGGATCCTGGTTAGACCAATTTC
GACATGGCTCTAATCCTTGGATGGCTAGATATCTTTACGCCATATTGTTTCTCATTGCTAATTTATTAGCTTGGGCTGTTCGTGATTATGGCCAT
AGCATTTTGAAAGAAATGAAGAGACTTAAAGGATGTAATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542886] | SGN-U565740 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343761 [Download][View] | Facility Assigned ID: TUS64G17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.940 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
