EST details — SGN-E543006
| Search information |
| Request: 543006 | Match: SGN-E543006 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192049 | Clone name: TUS-64-J15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91452 [cLEW-27-K22] | Trace: SGN-T114954 | EST: SGN-E302371 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192049 [TUS-64-J15] | Trace: SGN-T349682 | EST: SGN-E548807 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543006 | Length: 492 bp (963 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543006 [] (trimmed)
GGAAAATGGATTCATTTATTGGTGAATAACAAGTACAAGGAAATCAAGTTTCAAACATGGAAATTAAAAAACAAACAGACAAACCAACAAACAAA
AACAGAATCATAACAGAACCTATCCTTGTTCAACTGTAGTGTCAGCAGATTCACTACACACACTAATTTAACAATCCGCAAGCTTGATCTCCACA
CCTCCAATGGAGATATCACCTTTCTTTGGTACCAGAGTCACCGCGATAGTATCTTCATCTTCCAAACCAATGTCCTCCAACAGTTCTGTTATCGC
CAGCCGGAGAGTAGCAGTTGCAGTATGTTTAGGATCTCCAACTCTGTGTACATGTGGCAAGCTAGTATAACTCCCCGCAAACTCTGCCTTGTCAA
ACTCATTCGCGTTCACATTGTTATCCACGTTGAGGAACACATCTAATCTTAAGTAATCTCTGATATCATATTTTATTGCATTGAATGAAAAGACC
TCCTCATGGGCATTTTT
AACAGAATCATAACAGAACCTATCCTTGTTCAACTGTAGTGTCAGCAGATTCACTACACACACTAATTTAACAATCCGCAAGCTTGATCTCCACA
CCTCCAATGGAGATATCACCTTTCTTTGGTACCAGAGTCACCGCGATAGTATCTTCATCTTCCAAACCAATGTCCTCCAACAGTTCTGTTATCGC
CAGCCGGAGAGTAGCAGTTGCAGTATGTTTAGGATCTCCAACTCTGTGTACATGTGGCAAGCTAGTATAACTCCCCGCAAACTCTGCCTTGTCAA
ACTCATTCGCGTTCACATTGTTATCCACGTTGAGGAACACATCTAATCTTAAGTAATCTCTGATATCATATTTTATTGCATTGAATGAAAAGACC
TCCTCATGGGCATTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543006] | SGN-U581565 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343881 [Download][View] | Facility Assigned ID: TUS64J15_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 20.5 |
Working
