EST details — SGN-E543413
| Search information |
| Request: 543413 | Match: SGN-E543413 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192286 | Clone name: TUS-65-D12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95018 [cLEX-6-M3] | Trace: SGN-T116072 | EST: SGN-E304054 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C95018 [cLEX-6-M3] | Trace: SGN-T116209 | EST: SGN-E304191 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C192286 [TUS-65-D12] | Trace: SGN-T344289 | EST: SGN-E543414 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543413 | Length: 769 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543413 [] (trimmed)
CGATCAGGATAGTAACATTTGAATTCAATATCAAACCAAAACAGAGATCAAGAGGCAAAAGTTGGTCACAATATAGACCTTTTTTTCAGATGCCT
AATGAGGAATAATGATTATATAAATATTTGACTTACAGGGATTTATATTAGAGGCACTATGATATTAAAAGAAAAACAATAAATGTCAGGATTGC
TAGAAATCAACACACCTTAACATTAAGATAATCAGAGATGGCATCCAAAATGAATTCGATCTCATTCTCATGAGGTTCTGGCAGCATCGTTATGC
TGGTGTTTGAATCAGTGGTACCAGCTACTGTTCTGCCCAACCATGGAAGCATAAAGACCACTCGACCATCCTTAGTTTTAGGGACAATCAAGCCC
ATCCCGTCTGGAGAATAATAATCAGGAAGTATAATATGTACACCACTACTGGGACAAATCATGGGTTTTGCATCTTTATCAGCTAACGTCCGTAC
AGAATCACAAAAAGGCCCGGCAGCGTTAACAACAACTTTTGCATATGCATCAAACTCCTTCCCTGATAAATTATTCCGAATACGTGCACCAATTA
TTCTACCATCACCCTCATCTTTGAGAAGGGATACCACTTCTGCATGGTTAAGCACAGCTGCACCAGCCAAAGCAGCAGAGCATGCTAATGCAACA
TTGACGCGTGAGTCATTCATTTGTCCATCGTAATATACCACAGGTCCCTTCAGAGTTTTATCTTTTACATTTCGTGCGAGGGTAGGAAACAATTC
AACAGACTC
AATGAGGAATAATGATTATATAAATATTTGACTTACAGGGATTTATATTAGAGGCACTATGATATTAAAAGAAAAACAATAAATGTCAGGATTGC
TAGAAATCAACACACCTTAACATTAAGATAATCAGAGATGGCATCCAAAATGAATTCGATCTCATTCTCATGAGGTTCTGGCAGCATCGTTATGC
TGGTGTTTGAATCAGTGGTACCAGCTACTGTTCTGCCCAACCATGGAAGCATAAAGACCACTCGACCATCCTTAGTTTTAGGGACAATCAAGCCC
ATCCCGTCTGGAGAATAATAATCAGGAAGTATAATATGTACACCACTACTGGGACAAATCATGGGTTTTGCATCTTTATCAGCTAACGTCCGTAC
AGAATCACAAAAAGGCCCGGCAGCGTTAACAACAACTTTTGCATATGCATCAAACTCCTTCCCTGATAAATTATTCCGAATACGTGCACCAATTA
TTCTACCATCACCCTCATCTTTGAGAAGGGATACCACTTCTGCATGGTTAAGCACAGCTGCACCAGCCAAAGCAGCAGAGCATGCTAATGCAACA
TTGACGCGTGAGTCATTCATTTGTCCATCGTAATATACCACAGGTCCCTTCAGAGTTTTATCTTTTACATTTCGTGCGAGGGTAGGAAACAATTC
AACAGACTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543413] | SGN-U581948 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344288 [Download][View] | Facility Assigned ID: TUS65D12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 14.5 |
Working
