EST details — SGN-E543554
| Search information |
| Request: 543554 | Match: SGN-E543554 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192368 | Clone name: TUS-65-G22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92315 [cLEX-10-N17] | Trace: SGN-T116818 | EST: SGN-E305044 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192368 [TUS-65-G22] | Trace: SGN-T349772 | EST: SGN-E548897 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543554 | Length: 566 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543554 [] (trimmed)
CCTTTGAGCACACAGTTATATTATCATTGGTTTGTGAAGTGCTTGAAAATATAACACGATTCATATTCAGACCAAACATAGAGAAGCAAATATAG
TGTTTATATCAAACCAGAAGAAATTAAACAGTAGCAAGCTTAGTAGAACTGAGTTTGGATAGCATATCTCTGGCACTGACATAACAAGTACAATA
TCTGTGCAGCTGAGGCTGATGAGAGCAATCAGAAACCATGAATTTTGATGTGCTCTTTCTTCACGATTCCAGCCTGGACAAGAAAGGTAGAAACG
TTCTTCCTCTGGTCACCCTGAAGTTGAATAACCTGGCCTAGTTCAGGATCCTGGACAACAGTACCATTGCAGCAGAATTCTTTCTTGAGATCCTT
CAGTATCTTGTTATAGCTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAGGCTTTTCCTACCATTCCTTTGTTGTATACGGATGTGCACGTAAT
CTTTTGACCCAGCACCAGAGTTATCAGCATTTGCCTCAGCAAAGGGATCAAAAGCGGTAGGAATTTGGACGTCGAGATCAGACATGAAACC
TGTTTATATCAAACCAGAAGAAATTAAACAGTAGCAAGCTTAGTAGAACTGAGTTTGGATAGCATATCTCTGGCACTGACATAACAAGTACAATA
TCTGTGCAGCTGAGGCTGATGAGAGCAATCAGAAACCATGAATTTTGATGTGCTCTTTCTTCACGATTCCAGCCTGGACAAGAAAGGTAGAAACG
TTCTTCCTCTGGTCACCCTGAAGTTGAATAACCTGGCCTAGTTCAGGATCCTGGACAACAGTACCATTGCAGCAGAATTCTTTCTTGAGATCCTT
CAGTATCTTGTTATAGCTGAATTCTTTCTTCAACCCCTGCACAGTTGTCAGGCTTTTCCTACCATTCCTTTGTTGTATACGGATGTGCACGTAAT
CTTTTGACCCAGCACCAGAGTTATCAGCATTTGCCTCAGCAAAGGGATCAAAAGCGGTAGGAATTTGGACGTCGAGATCAGACATGAAACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543554] | SGN-U581108 | Tomato 200607 | Build 2 | 129 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344429 [Download][View] | Facility Assigned ID: TUS65G22_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 14.5 |
Working
