EST details — SGN-E543786
| Search information |
| Request: 543786 | Match: SGN-E543786 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192503 | Clone name: TUS-65-M13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93054 [cLEX-13-I5] | Trace: SGN-T117552 | EST: SGN-E306459 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192503 [TUS-65-M13] | Trace: SGN-T344660 | EST: SGN-E543785 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543786 | Length: 773 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543786 [] (trimmed)
GCTCACATCTCAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGA
CATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCC
CAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTG
GTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGC
TGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGC
AACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCANGTTGGGAT
AAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAAGCGCAGCAATTGGAGCAAACAACCCAGCAGCTCA
ATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAAGCCCGTTCACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTA
GCCTCACTTCGAA
CATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCC
CAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTG
GTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGC
TGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGC
AACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCANGTTGGGAT
AAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAAGCGCAGCAATTGGAGCAAACAACCCAGCAGCTCA
ATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAAGCCCGTTCACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTA
GCCTCACTTCGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543786] | SGN-U568670 | Tomato 200607 | Build 2 | 36 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344661 [Download][View] | Facility Assigned ID: TUS65M13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |
Working
