EST details — SGN-E543848
| Search information |
| Request: 543848 | Match: SGN-E543848 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192539 | Clone name: TUS-65-O1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93234 [cLEX-14-B21] | Trace: SGN-T118275 | EST: SGN-E305789 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192539 [TUS-65-O1] | Trace: SGN-T344722 | EST: SGN-E543847 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543848 | Length: 762 bp (837 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543848 [] (trimmed)
GCTTCTACGTCGCAGTTGCTCTGCTAATTTGTTGAGCTTGAAGCAGATTTTTCCTTGAGTTGCCATGAACACGTCTTGTGGAGCAAATTTGGAAC
TATCAAGATGCATTGCTGCATCCCCTGTTTGTCGTTTAAAATCTTCTATCTTTGAGTTAAGATCATGTATACCCAAGCTACAAGGCCTCTCAAAG
AAGCTATTGCCTTTATGCAAAGATATAAATGCTAGAAGTAACAAGGAGAGAAGCATTCCATTCTCTGTTACTTGTAGTGGCAGTCAGGTTGACAC
TGCTGCAGATGAGCCCAGCAGTCTTACATATAAGGATGCTGGTGTGGACATCGATGCAGGATCAGAGCTTGTGAAGAGAATAGCCAAAATGGCAC
CTGGAATTGGAGGATTTGGTGGACTCTTTCCATTAGGGGATTCATATCTTGTGGCTGGTACTGATGGTGTGGGGACAAAACTTAAGTTGGCATTT
GAAACGGGAATTCATGATACCATTGGGATTGATCTGGTTGCGATGAGTGTTAATGACATTGTCACTTCTGGAGCAAAACCTTTATTTTTCCTTGA
TTATTTTGCAACCAGCCGACTTGATGTTGACCTTGCAGAGAAGGTCATAAAAGGTATTGTGGATGGTTGCCAGCAATCTGACTGTGCTCTTCTAG
GGGGAGAGACTGCAGAGATGCCAGATTTCTATGCCGAAGGTGAGTATGACCTCAGTGGGTTTGCTGTTGGCATTGTGAAAAAGGATTCAGTTATT
GA
TATCAAGATGCATTGCTGCATCCCCTGTTTGTCGTTTAAAATCTTCTATCTTTGAGTTAAGATCATGTATACCCAAGCTACAAGGCCTCTCAAAG
AAGCTATTGCCTTTATGCAAAGATATAAATGCTAGAAGTAACAAGGAGAGAAGCATTCCATTCTCTGTTACTTGTAGTGGCAGTCAGGTTGACAC
TGCTGCAGATGAGCCCAGCAGTCTTACATATAAGGATGCTGGTGTGGACATCGATGCAGGATCAGAGCTTGTGAAGAGAATAGCCAAAATGGCAC
CTGGAATTGGAGGATTTGGTGGACTCTTTCCATTAGGGGATTCATATCTTGTGGCTGGTACTGATGGTGTGGGGACAAAACTTAAGTTGGCATTT
GAAACGGGAATTCATGATACCATTGGGATTGATCTGGTTGCGATGAGTGTTAATGACATTGTCACTTCTGGAGCAAAACCTTTATTTTTCCTTGA
TTATTTTGCAACCAGCCGACTTGATGTTGACCTTGCAGAGAAGGTCATAAAAGGTATTGTGGATGGTTGCCAGCAATCTGACTGTGCTCTTCTAG
GGGGAGAGACTGCAGAGATGCCAGATTTCTATGCCGAAGGTGAGTATGACCTCAGTGGGTTTGCTGTTGGCATTGTGAAAAAGGATTCAGTTATT
GA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543848] | SGN-U581127 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344723 [Download][View] | Facility Assigned ID: TUS65O01_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
