EST details — SGN-E545804
| Search information |
| Request: 545804 | Match: SGN-E545804 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193678 | Clone name: TUS-68-N12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101570 [cLHT-1-N17] | Trace: SGN-T169833 | EST: SGN-E355718 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193678 [TUS-68-N12] | Trace: SGN-T350142 | EST: SGN-E549267 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545804 | Length: 699 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E545804 [] (trimmed)
AAAGGGAAATTGCATCAACTTTATTCGTTTATATTAAGAAGAAACATTAGTAGCAACATCAGGAATACAGTGGAACGGAGGACTAGTCCCAGTCC
CACAACATTCCTTATTATGAAAATCAATCTGACAAAGATAGAGGTAAGGTCTGCGTACACCTCATCCTCCCCCCAGACGAGGTATGTTTTTATTG
TTGAGAAATAAACAAGACAAGGAAATGAATATCTGCTTTGGTAAGACAATTATAAATGGAGTATGAATTTGTCCCATAATTCATCAAGTGGGTTG
CTGTTCTTCTTTGTTACGAAAGTCCTCGTTAATTTTTGGAGTAGCAAATTCAAGAAGTTGCTTGTCATGCTCGAACACACTCATTTCTTGTTCAT
CCAAGTTAACAAAAGCTTCAATTCCTCCATCATATGTCCTCATCAAATGAATAAATTTATTAAGTGGACCCTTTGCAATGCTTGATCTAATAGGC
TTCCCAAATCCAAAATCTAAATCTTGTGAAAATGGGAACTTACATACGCTACTCGAAATGTACAAATCACACTTCCTTTTAGAGAATGGCTCCTC
CCCTGTTCTATATGTATCTAACATCTCTATAGCGAATTCATTTTCTTCAACATTATTTCTTGCGGAGAGAAAATTTTTAGACTTTTTTATATCGG
TTACTAATTTTGGTAACTTCAGCTCTTCCTCGTC
CACAACATTCCTTATTATGAAAATCAATCTGACAAAGATAGAGGTAAGGTCTGCGTACACCTCATCCTCCCCCCAGACGAGGTATGTTTTTATTG
TTGAGAAATAAACAAGACAAGGAAATGAATATCTGCTTTGGTAAGACAATTATAAATGGAGTATGAATTTGTCCCATAATTCATCAAGTGGGTTG
CTGTTCTTCTTTGTTACGAAAGTCCTCGTTAATTTTTGGAGTAGCAAATTCAAGAAGTTGCTTGTCATGCTCGAACACACTCATTTCTTGTTCAT
CCAAGTTAACAAAAGCTTCAATTCCTCCATCATATGTCCTCATCAAATGAATAAATTTATTAAGTGGACCCTTTGCAATGCTTGATCTAATAGGC
TTCCCAAATCCAAAATCTAAATCTTGTGAAAATGGGAACTTACATACGCTACTCGAAATGTACAAATCACACTTCCTTTTAGAGAATGGCTCCTC
CCCTGTTCTATATGTATCTAACATCTCTATAGCGAATTCATTTTCTTCAACATTATTTCTTGCGGAGAGAAAATTTTTAGACTTTTTTATATCGG
TTACTAATTTTGGTAACTTCAGCTCTTCCTCGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545804] | SGN-U574321 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346679 [Download][View] | Facility Assigned ID: TUS68N12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
