EST details — SGN-E546577
| Search information |
| Request: 546577 | Match: SGN-E546577 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194128 | Clone name: TUS-70-A6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102791 [cLHT-31-L1] | Trace: SGN-T171867 | EST: SGN-E359481 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194128 [TUS-70-A6] | Trace: SGN-T350269 | EST: SGN-E549394 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546577 | Length: 775 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546577 [] (trimmed)
GCAAATAAGTAAAGAGACCAGTTTTCTCCAAACAAACAGATAGATTTTCAGGAATTTAGAAACTATATCAACGCTGTTCTTAAACGAGACTCAAC
AAAGTTCAGTAGATAGATTTTGAAAGATGGAACCTCATATCGCTCTACTTCCAAGTGCTGGAATGGGGCATTTGATGCCATTCCTTCGCCTCGCT
GCCATGTTAGCTTCTCGTAATTGTAAGGTCACTTTACTCACTGCCCAGCCTACTGTCTCTGCCGCTGAATCTAAACATTTGAATAGCTTCTTTTC
TGCGCATCCACACATTCAACGCCTTGATTTTCAAGTCGTTCCCCTCCAATCGTCCAATCCTCATGGTGATCCCTTCTTTCTCCAGTTTGAAGCTA
TCATTCGCTCTGTTCATCTTCTTCCTCCTCTTCTATCTTCATTATCTCCACCCATCTCCGCTCTTTTTCTTGACATTGCTGCTGCAACGTGCGTT
GATCAGCTTGCTGATCATCCATCATTGTCTATATCCTACTACATCTTAAGTACAACTTCTGCTAGATTTTTTTCTCTTATTACCCACCTACCTCA
TTTGACTCTTGAAAGCAGTTGCGTGAACTTGAAGCTTCATGGTCTACCCTCATTTTCAATATCGAACATCCCTCCTCCTATTTTCAACCCACAGA
ATCTCTTCACAACTCAGTTGATCTCAAACGCTCGAGCTATCTCCGGAGTTAAAGGTGTTGTTTCAAATACGTTCCATTGGTTTGAGGCTGAGACA
ATTGAAGCCCTCACA
AAAGTTCAGTAGATAGATTTTGAAAGATGGAACCTCATATCGCTCTACTTCCAAGTGCTGGAATGGGGCATTTGATGCCATTCCTTCGCCTCGCT
GCCATGTTAGCTTCTCGTAATTGTAAGGTCACTTTACTCACTGCCCAGCCTACTGTCTCTGCCGCTGAATCTAAACATTTGAATAGCTTCTTTTC
TGCGCATCCACACATTCAACGCCTTGATTTTCAAGTCGTTCCCCTCCAATCGTCCAATCCTCATGGTGATCCCTTCTTTCTCCAGTTTGAAGCTA
TCATTCGCTCTGTTCATCTTCTTCCTCCTCTTCTATCTTCATTATCTCCACCCATCTCCGCTCTTTTTCTTGACATTGCTGCTGCAACGTGCGTT
GATCAGCTTGCTGATCATCCATCATTGTCTATATCCTACTACATCTTAAGTACAACTTCTGCTAGATTTTTTTCTCTTATTACCCACCTACCTCA
TTTGACTCTTGAAAGCAGTTGCGTGAACTTGAAGCTTCATGGTCTACCCTCATTTTCAATATCGAACATCCCTCCTCCTATTTTCAACCCACAGA
ATCTCTTCACAACTCAGTTGATCTCAAACGCTCGAGCTATCTCCGGAGTTAAAGGTGTTGTTTCAAATACGTTCCATTGGTTTGAGGCTGAGACA
ATTGAAGCCCTCACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546577] | SGN-U582017 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347452 [Download][View] | Facility Assigned ID: TUS70A06_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 14.5 |
Working
